AMCG00003260


Basic Information

Item Value
gene id AMCG00003260
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 16590767 ~ 16610586 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003260
ATGAAAGCCTTGGGCAGATTACAGAGCTGCAATCTCCTCCGCTTCCGCATGAGCAGCCTGAGTGATAAGAACTGGTACAGAGCCATTGTGTTGGAAGCTACAGACTCTGAAGCCACCGTGGTCTATGCAGATTATGGGAATACAGAAAAAGTTCCTTTCTCCAGAATCCTGCCCATCACAAGAAAGCACCTGGAGCTCCCTTTCCACACCATTCAGTGCAGACTTTCAGATTTGCACCGTCTGAGTGAGTTGTCTGCAGATTTATCAAGATACTGCCCGACCGCCAATGCCACCTTCACTCCAGTTGTCGCAGAGCCCTGCTGTGCCATTTTCCCTGGAGATGGTGCCTGGTACCGTGGGATGGTACAGGATGTCTCACCCAATGGGAAGGCTGTGGTTTTCTTTGGAGATTATGGAAACACAAGTGAAGTAGCAGTGGACAAGCTGTGCCCCATTCTCCCCAAATATTTGAAGCTCCCCTTTCAAGCAGTGAAGTGTTGGCTGGCAGGTGATAAGAACTGGTACAGAGCCATTGTGTTGGAAGCTACAGACTCTGAAGCCACCGTGGTCTATGCAGATTATGGGAATACAGAAAAGGTTCCTTTCTCCAGAATCCTGCCCATCACAAGAAAGCACCTGGAGCTCCCTTTCCACACCATTCAGTGCAGACTTTCAGgACTGGAGCTGCTACCAGAAGAGTGGCCCTCCTCTGCGATGAAGGTGTTCGAATCTCTACTGGGGGGCAAAGTGCTGGCCTCTGTGAGGGAGTCTGAGGGCAATACACACACCGTGGATCTGACGAGCTGCACAGAAAGCAGAGAAGTGAACGTCACCTGGATGATGCTGACATACTTCAGGAGTGAACAAAAAGAAGCTAAATCGGATGTGTGTGAGCCCAACACGCAGGTGGAGGAAATGCCAAAGCCTCGCTCGAGCAGTGTTGCTCTAGGTGCGAATAGTGGATTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003260 True 969 mRNA 0.50 6 16590767 16610586

Neighbor

gene id symbol gene type direction distance location
AMCG00003253 NA coding upstream 142506 16424886 ~ 16448261 (+)
AMCG00003249 LOC105010526,LOC106607942 coding upstream 598244 15971795 ~ 15992523 (+)
AMCG00003248 gfra1a,LOC107754853,LOC107557962,LOC103356746,LOC107711414 coding upstream 659736 15927768 ~ 15931031 (+)
AMCG00003247 NA coding upstream 698901 15887116 ~ 15891866 (+)
AMCG00003243 tspan14,tsn14,LOC106577130,LOC107743579 coding upstream 1289627 15288624 ~ 15301140 (+)
AMCG00003258 LOC107689962 coding downstream 14864 16625450 ~ 16653567 (+)
AMCG00003259 adrb1,LOC102789796,LOC107581665,LOC107689959 coding downstream 54848 16665434 ~ 16671432 (+)
AMCG00003261 NA coding downstream 100686 16711272 ~ 16722062 (+)
AMCG00003262 NA coding downstream 134638 16745224 ~ 16748526 (+)
AMCG00003263 NA coding downstream 160738 16771324 ~ 16789958 (+)
G141592 NA non-coding upstream 1335923 15252840 ~ 15254844 (+)
G141582 NA non-coding upstream 1373216 15217242 ~ 15217551 (+)
G141574 NA non-coding upstream 1400422 15189983 ~ 15190345 (+)
G141573 NA non-coding upstream 1404442 15186071 ~ 15186325 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding upstream 2081928 14500971 ~ 14508839 (+)
G141829 NA non-coding downstream 188373 16798959 ~ 16801312 (+)
G141885 NA non-coding downstream 421839 17032425 ~ 17035242 (+)
G141955 NA non-coding downstream 907134 17517720 ~ 17517921 (+)
G141965 NA non-coding downstream 1092586 17703172 ~ 17703460 (+)
G141966 NA non-coding downstream 1102074 17712660 ~ 17712864 (+)
AMCG00003256 NA other upstream 31561 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 89773 16464294 ~ 16500994 (+)
AMCG00003207 NA other upstream 1985219 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 2290774 14283850 ~ 14299993 (+)
G141331 NA other upstream 2406124 14180780 ~ 14184643 (+)
G141962 NA other downstream 1065693 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 1110658 17721244 ~ 17725381 (+)
G142078 NA other downstream 1977988 18588574 ~ 18692204 (+)
G142172 NA other downstream 2925107 19535693 ~ 19537091 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 3008295 19618881 ~ 19633150 (+)

Expression


Co-expression Network