AMCG00003262


Basic Information

Item Value
gene id AMCG00003262
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 16745224 ~ 16748526 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003262
GAATCACTTGTGAAGCAGCAGGAGTACCTGGAAAGGCAAAAGGAagctgtgaaatacaaaattaaaaaactgacCGCAAAGCAGACAGACATCACGaaaaaatcCACAGTGATAATGGAAAGCATTTCCAAGAAGTATGAAGATATAAAAAGAGTGCTGGATGAGGATATGAAAGTCACCTTAAACCAGCTGGAAATGGAAGCTCAAGCTGCCATCTATACCCTTGATGTCCTCATTGAGAAGTGTAACCTGGCCACGGCAGACATTGAACGGGAATTATCCGAGCTTAGTGATCAGCTGGAACAGAAAACCTCACAAGCGATGGAACCTATAAACATTGGCAATCTGGATTCCATCCAACTCGATGGGTACAAGTCAGATCAGCTTCTTCAGTTAATTAACAATCTGTTCGTATGCGTTCGCTCACAGATTCCAGTCACCAAAAAAGTCTACCAGAGCTACGCATCCACGGCTGTGCTGGATCCCGATACAGCTCATCCAAAACTGTGTATCTCTGCCGATGGCACCACAGCCACCTTCACGGATGAGTGGCAGGACGTTCCCAATAACCCGGTGCGCTTTGACACCACCCTGAACGTCATCAGCTCCGAGGGCTTCTCAGATGGGAGGCATTACTTGGAGCTGGAGGTTGGTGGAAAGACCTACTGGGAGCTGGGGCTCACCTATCCCAGCATTCCCAGGAAAGGCAGGGAGGAGACATGCTGgctggggaggggagaggacTCCTGGTGCGTGGAGTTCTTCGAAGGGGACTATACCGCCTGGCACAACGGGGTGTCCCACCAACTCCCAATCAGCCAAAGCTATAACAGGATTGGCGTCTATCTCAGCTACCCAGCTGGACTCATCTCTTTCCATGCAGTGGACGACCTGACTCAGATCGTGGCCTTCTGTGCCGGCACCTTCACCGACACCCTCCATCTTGCGGTTTGCCCCGGGCACGACAATGAAGAGACCAACAGGACACCGGTTAAAATCTGCAGTGTTTTCAAACCCATGACCTTCAATTCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003262 True 1035 mRNA 0.50 4 16745224 16748526

Neighbor

gene id symbol gene type direction distance location
AMCG00003261 NA coding upstream 23162 16711272 ~ 16722062 (+)
AMCG00003259 adrb1,LOC102789796,LOC107581665,LOC107689959 coding upstream 73792 16665434 ~ 16671432 (+)
AMCG00003258 LOC107689962 coding upstream 91657 16625450 ~ 16653567 (+)
AMCG00003260 NA coding upstream 134638 16590767 ~ 16610586 (+)
AMCG00003253 NA coding upstream 296963 16424886 ~ 16448261 (+)
AMCG00003263 NA coding downstream 22798 16771324 ~ 16789958 (+)
AMCG00003264 aldh18a1,LOC107081732 coding downstream 166439 16914965 ~ 16930855 (+)
AMCG00003265 NA coding downstream 184995 16933521 ~ 16941107 (+)
AMCG00003281 zdhhc6,LOC107684040,LOC107755527 coding downstream 557974 17306500 ~ 17311221 (+)
AMCG00003282 NA coding downstream 583808 17332334 ~ 17354879 (+)
G141592 NA non-coding upstream 1490380 15252840 ~ 15254844 (+)
G141582 NA non-coding upstream 1527673 15217242 ~ 15217551 (+)
G141574 NA non-coding upstream 1554879 15189983 ~ 15190345 (+)
G141573 NA non-coding upstream 1558899 15186071 ~ 15186325 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding upstream 2236385 14500971 ~ 14508839 (+)
G141829 NA non-coding downstream 50433 16798959 ~ 16801312 (+)
G141885 NA non-coding downstream 283899 17032425 ~ 17035242 (+)
G141955 NA non-coding downstream 769194 17517720 ~ 17517921 (+)
G141965 NA non-coding downstream 954646 17703172 ~ 17703460 (+)
G141966 NA non-coding downstream 964134 17712660 ~ 17712864 (+)
AMCG00003256 NA other upstream 186018 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 244230 16464294 ~ 16500994 (+)
AMCG00003207 NA other upstream 2139676 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 2445231 14283850 ~ 14299993 (+)
G141331 NA other upstream 2560581 14180780 ~ 14184643 (+)
G141962 NA other downstream 927753 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 972718 17721244 ~ 17725381 (+)
G142078 NA other downstream 1840048 18588574 ~ 18692204 (+)
G142172 NA other downstream 2787167 19535693 ~ 19537091 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 2870355 19618881 ~ 19633150 (+)

Expression


Co-expression Network