Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003265 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 16933521 ~ 16941107 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003265 | True | 543 | mRNA | 0.48 | 8 | 16933521 | 16941107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003264 | aldh18a1,LOC107081732 | coding | upstream | 2666 | 16914965 ~ 16930855 (+) |
| AMCG00003263 | NA | coding | upstream | 143563 | 16771324 ~ 16789958 (+) |
| AMCG00003262 | NA | coding | upstream | 184995 | 16745224 ~ 16748526 (+) |
| AMCG00003261 | NA | coding | upstream | 211459 | 16711272 ~ 16722062 (+) |
| AMCG00003259 | adrb1,LOC102789796,LOC107581665,LOC107689959 | coding | upstream | 262089 | 16665434 ~ 16671432 (+) |
| AMCG00003281 | zdhhc6,LOC107684040,LOC107755527 | coding | downstream | 365393 | 17306500 ~ 17311221 (+) |
| AMCG00003282 | NA | coding | downstream | 391227 | 17332334 ~ 17354879 (+) |
| AMCG00003284 | NA | coding | downstream | 435966 | 17377073 ~ 17402750 (+) |
| AMCG00003295 | smndc1 | coding | downstream | 951116 | 17892223 ~ 17896705 (+) |
| AMCG00003301 | NA | coding | downstream | 1099668 | 18040775 ~ 18059015 (+) |
| G141829 | NA | non-coding | upstream | 132209 | 16798959 ~ 16801312 (+) |
| G141592 | NA | non-coding | upstream | 1678677 | 15252840 ~ 15254844 (+) |
| G141582 | NA | non-coding | upstream | 1715970 | 15217242 ~ 15217551 (+) |
| G141574 | NA | non-coding | upstream | 1743176 | 15189983 ~ 15190345 (+) |
| G141573 | NA | non-coding | upstream | 1747196 | 15186071 ~ 15186325 (+) |
| G141885 | NA | non-coding | downstream | 91318 | 17032425 ~ 17035242 (+) |
| G141955 | NA | non-coding | downstream | 576613 | 17517720 ~ 17517921 (+) |
| G141965 | NA | non-coding | downstream | 762065 | 17703172 ~ 17703460 (+) |
| G141966 | NA | non-coding | downstream | 771553 | 17712660 ~ 17712864 (+) |
| G141999 | smc3,LOC107685530 | non-coding | downstream | 897604 | 17838711 ~ 17840604 (+) |
| AMCG00003256 | NA | other | upstream | 374315 | 16527189 ~ 16559206 (+) |
| AMCG00003257 | ablim1 | other | upstream | 432527 | 16464294 ~ 16500994 (+) |
| AMCG00003207 | NA | other | upstream | 2327973 | 14601317 ~ 14605548 (+) |
| AMCG00003195 | NA | other | upstream | 2633528 | 14283850 ~ 14299993 (+) |
| G141331 | NA | other | upstream | 2748878 | 14180780 ~ 14184643 (+) |
| G141962 | NA | other | downstream | 735172 | 17676279 ~ 17678522 (+) |
| AMCG00003291 | bbip1 | other | downstream | 780137 | 17721244 ~ 17725381 (+) |
| G142078 | NA | other | downstream | 1647467 | 18588574 ~ 18692204 (+) |
| G142172 | NA | other | downstream | 2594586 | 19535693 ~ 19537091 (+) |
| AMCG00003323 | rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 | other | downstream | 2677774 | 19618881 ~ 19633150 (+) |
