AMCG00003316


Basic Information

Item Value
gene id AMCG00003316
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19569804 ~ 19573974 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003316
CCCATATAACACATTAAccggttatttattttattaaaacgcACACATTTGGCCCTGCTAAATAAAAGCCAACCCGCGCACAACACAAACGTTTTCTTCAAATTATACCATTCGGTTAATTGTAAGCATGTCCGGGTATGCACTGTGCctttaataaaagtatatttcatAACAGTGGGCGTGCATTTTCTGCAGAGCAAAGAATAAAACGGAGCATGCGTgagtttctttaaatataagtGTATCACTCGCTTTCTTTGCTGTTTAACAGAACTGCAACTCATTTTTTACACTTAGTGGTGTTTTGGGAAATGGAGCCAACTGCAAAGTGTGTCGGCAAAGGCAGCCCTGCCCCTGGTGCTGTACCTGAGGGAAAGCTCCGGCTATACAGCATGAGGTTCTGCCCTTACGCACAGAGAACCCGCCTCATCCTTCATGCTAAAGGTGTCCAgCATGAGATTGTCAACATCAATCTGAAGGACAAACCTGATTGGTTCCTTGAGAAGAATCCCTTGGGCCTAGTCCCAGTGCTGGAGACTCCCAGTGGTCAGGTGATCTCTGAGTCCCCAATCACGTGTGATTACCTGGATGAGGCATACCCTGGGAAGAAACTGCTCCCAAAGGATCCCTATGAGAAAGCCCAGCAGAAGATGCTGCAAGAGCAGTTCTCCAAGaTCCTTGTCAAGAGAAAGATCAAGTTCTTCGGCGGAGACTCTGTGTCTATGATTGACTATATGATCTGGCCGTGGTTTGAGAGGATGGAATCGCTCTCTTTGCAACTCTGCCTGGATAGCATTCCAGAGTTGAAGAGCTGGACCGAGCGCATGTTGCAGGACCCCTCAGTGAAGGCCAGCATTATTGACTCCGACACTTACAAGGCCTTTTACAAGACGTACATTGATGGCAAACCTAATTATGATTATGGTCTTTAAGCTCAAGGTGAAAATGCTGGTATACAGGTTCTTTATTCTTTTCcaggttttatattttcatgttaaAAACCTGCTGTATCAGACTTCCCATGTCCTCAAGTTAATCAAGCAAGGCTATACCCTTAGGACATTATTTCTTCAAAGCCTCcagttttgtttcaaaatgaattcTCTCTAgcatggctgttttttttttaaatagatcaatctgatgattaatgtattttgagcAAACTAGTATGTAATCTGTTATAGAAGCTATTTCTGTGTGTATCCTGTTCTCTATAATGTCATTAAAACTTCTGATACTgcaaattcagttattttgataTTGTGTCAATAAATCCAGTTTGTTGTA

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003316 True 1290 mRNA 0.42 5 19569804 19573974

Neighbor

gene id symbol gene type direction distance location
AMCG00003315 slk coding upstream 114838 19415692 ~ 19454966 (+)
AMCG00003311 LOC103355274,LOC101166281 coding upstream 344848 19210583 ~ 19224956 (+)
AMCG00003312 neurl1,LOC107676877,LOC107746293 coding upstream 373988 19185133 ~ 19195816 (+)
AMCG00003306 LOC106586852,LOC105012299,LOC107729347,LOC107746059 coding upstream 1076014 18439507 ~ 18493790 (+)
AMCG00003305 NA coding upstream 1229969 18306046 ~ 18339835 (+)
AMCG00003321 NA coding downstream 14660 19588634 ~ 19605421 (+)
AMCG00003322 NA coding downstream 36780 19610754 ~ 19614023 (+)
AMCG00003328 NA coding downstream 88110 19662084 ~ 19677407 (+)
AMCG00003329 NA coding downstream 136222 19710196 ~ 19728221 (+)
AMCG00003327 nt5c2 coding downstream 154302 19728276 ~ 19741080 (+)
G142174 NA non-coding upstream 28557 19541042 ~ 19541247 (+)
G142170 NA non-coding upstream 37937 19531412 ~ 19531867 (+)
G142146 NA non-coding upstream 56672 19512483 ~ 19513132 (+)
G142086 NA non-coding upstream 727075 18842454 ~ 18842729 (+)
G142085 NA non-coding upstream 729051 18835540 ~ 18840753 (+)
G142194 NA non-coding downstream 19904 19593878 ~ 19594267 (+)
G142205 NA non-coding downstream 42287 19616261 ~ 19616567 (+)
G142340 NA non-coding downstream 554393 20128367 ~ 20128715 (+)
G142354 NA non-coding downstream 700359 20274333 ~ 20274616 (+)
G142376 NA non-coding downstream 1021496 20595470 ~ 20599545 (+)
G142172 NA other upstream 32713 19535693 ~ 19537091 (+)
G142078 NA other upstream 877600 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 1844423 17721244 ~ 17725381 (+)
G141962 NA other upstream 1891282 17676279 ~ 17678522 (+)
AMCG00003256 NA other upstream 3010598 16527189 ~ 16559206 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 44907 19618881 ~ 19633150 (+)
AMCG00003324 NA other downstream 77202 19651176 ~ 19658477 (+)

Expression


Co-expression Network