AMCG00003333


Basic Information

Item Value
gene id AMCG00003333
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19850325 ~ 19856866 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003333
CCAGTTCTTTTCAGGCCCTGTCCGTCACTCAGGCTGGTGGATGTATGGAAGCCCGTggtattttgaaagcatttcccAAAGTGAAGAGGCCAGGCGCTCCTACAAAGAAGGATGAACCGgtgaataaaagaaaacaggaggAAATGGTCAGCGGTCATTGGTTCAGTGGTGTGTCTGCGCACATCATCCCAGCTGGGATTGGGAATGCCAGGACCACCATCTTTCAGAAACAAATCATCCAAAATGGTGGCCAGGTCAGAGACACATTCTCTCCCAGTGTCACTCACGTCATTGTGGATGACTCCATGGACTGCCACCGTGCTTTGCGCCTGCTGAAGATTGACAAGCTTCCCCCGGCGGTTCAGTTGGTCAGATGCTCCTGGCTGAGTCTGTGCATCACTGAAAAGAAGCTTCTCAGCACTGCTGGCTACAGCCTCTTCATGATTGACAGGCACCTGGATTCAAGTCATGAGGGTGCAAGAGCAGATTCCCAGCCTGGTGATGGACCTGTTTTGGGGACAAATGATAGTCTGCCGCAGTTTAATACTGATCTGAACAAAGAGAAGAGCACCATTCAGCACACGACCTGTGATGATGAAGGGAGTGATGCAGAAGAGACGAGTGTCTCCCAGAGTGACCTGGAGGCTCTGATCTCAGGGCAGTACCCCAGTCCTGGGAAATCCAGCTCAGCACAGCCCTCTGTCTCTGCGAAATGGGTTTGCGCTAACTCCTCCCAGGCCAAGAAAGACAATCATAATCAGCACATCACAGACAAGCTCGAGGTTCTGGCCAAGGCCTACACCCACCAGGGGGACAAGTGGAGAGCGCTGGGATACTCCAAAGCCATCAACGCACTGAAGAGCTACCACAAGCCTGTCACTTCATATGAGGAGGCCTGTAAGATCCAGGGCATTGGGAAGCGGATGGCAGACAAGATCAAGGAGATCCTAGAGAGTGGCCACCTTCGCAAGCTGGACCACATTGGAGAGAGTGTGCCAGTGCTGGAGCTCTTCACAAACATCTGGGGGGCTGGGGCAAAGACTGCACAGATGTGGTACCAACAGGGATTTCGCACTCTGGAAGACATTCGTACCAAAGCCACTCTGTCAAGTCAGCAGGCAGTTGGACTGAAACACTATGAGGACTTCCAGGATCGCATGCCAAGAGAGGAGGCCGCTGAGATTGAAAAAACGGTGAGGGAAGCAGCCCTGCGTTTGAATGGGGGGCTACTGGCGATGGCGTGTGGCTCGTACCGCCGAGGGAAGGCCTCTTGTGGAGATGTGGATGTCCTCATCACTCACCCCGATGGCAAATCTCACAAAGGAGTTTTCAGTAAAATACTGCACAGTCTCCATCAAACTGGCTTCCTGACAGATGACTTGGTGAGCCATGAGGAGAACGGGGAGCAGAAGAAATACCTGGGGGTGTGTCTCCTTCCAGGCCTGGGACACCGCCACCGCAGGCTGGACATCATCGTGGTGCCTTACAGTGAGTTTGCCTGCGCTCTTATGTACTTCACCGGCTCGGCACATTTCAACCGCTCCATGAGGGCCCTGGCCAAAACCAACGGGATGAGCCTCTCCGAGCACTCACTCAACAAAGATGTGCTGCGCACAGGCAGTGTGAAGGTCAGCACCGGCCTGCCCCTGCCCACGCTTACGGAGAAAGACATTTTCACTCACCTGGGCCTGCCCTACAGGGAACCACAGGAGAGGGATTGGTAAAACAACCATACGCAGCTGTCTAACAATTTTacctttggttttattttggtcttAAGGATCTTAATGGTGTGTTCCTTGGCTTGTCTTGGAGAGCTGCTAGATACCAGGTTTATTTGTGAGCTGCAGGGGAGGAATTcagggatttttttcttttcattgttttttttttttttttttttttt

Function

GO: NA

KEGG:

id description
K03512 POLL; DNA polymerase lambda

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003333 True 1906 mRNA 0.52 8 19850325 19856866

Neighbor

gene id symbol gene type direction distance location
AMCG00003335 NA coding downstream 2926 19829188 ~ 19847399 (-)
AMCG00003336 cnnm2,LOC107588659,LOC107673921,LOC107656926,LOC107585325,LOC107716327 coding downstream 88031 19747426 ~ 19762294 (-)
AMCG00003330 LOC106588656,LOC106564629,LOC105012231 coding downstream 143436 19699986 ~ 19706889 (-)
AMCG00003326 LOC106564630,LOC106588642 coding downstream 188676 19656665 ~ 19661649 (-)
AMCG00003325 NA coding downstream 196171 19633888 ~ 19654154 (-)
AMCG00003334 NA coding upstream 6907 19863773 ~ 19867810 (-)
AMCG00003338 NA coding upstream 38445 19895311 ~ 19900232 (-)
AMCG00003339 fgf8a,fgf8,LOC107673879,LOC107585369,LOC107716294,LOC107696243 coding upstream 53410 19910276 ~ 19929271 (-)
AMCG00003342 slc2a15a,LOC107716293,LOC107673883,LOC107696166,LOC107708408,LOC108442702,LOC103035008,LOC107585370 coding upstream 138153 19995019 ~ 20005313 (-)
AMCG00003341 fbxw11b,LOC106568099,LOC105893085,LOC107687420,LOC105905987 coding upstream 162992 20019858 ~ 20033589 (-)
G142200 NA non-coding downstream 251211 19597329 ~ 19599114 (-)
G142176 NA non-coding downstream 301393 19548641 ~ 19548932 (-)
G142090 NA non-coding downstream 1012840 18835540 ~ 18837485 (-)
G142066 NA non-coding downstream 1543642 18306362 ~ 18306683 (-)
G142064 NA non-coding downstream 1545347 18304631 ~ 18304978 (-)
G142348 NA non-coding upstream 323929 20180795 ~ 20181023 (-)
G142357 NA non-coding upstream 518520 20375386 ~ 20375626 (-)
G142404 NA non-coding upstream 798197 20655063 ~ 20669631 (-)
G142406 NA non-coding upstream 802746 20659612 ~ 20743604 (-)
G142417 NA non-coding upstream 901253 20758119 ~ 20758457 (-)
AMCG00003320 NA other downstream 280710 19543637 ~ 19569615 (-)
G141826 NA other downstream 3101894 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 4709506 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 5175905 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 6420001 13407272 ~ 13430324 (-)

Expression


Co-expression Network