AMCG00003334


Basic Information

Item Value
gene id AMCG00003334
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19863773 ~ 19867810 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003334
ATGTCCAATAAGCTCCCACCTGGAGCGAAGTGGTACTTGAGAGAGACCTCTGAAGGGGCTAGAAAGACTGGGCTGCCAGTGATCATCCtctcctgtttttctctctctgtcagctgCCAACAACTCCTTTGCCTGGGATCTGACTTCCGGAGGGGCGCTGGGGTCCTGGACATGGTCTTTGAGTCTCCGTCAACACTGCTCTCCTGTGGCTATGACACCTACATCCGTTACTGGGACCTCAGGGTCAGCTCAGGGAAGTGTGTCATGGAGTGGGAGGAGCCTCACGACAGTGCCCTGTACTGTGTCCAGAGCGACGGGAACCACATGATCGCCAGTGGCTCTTCCTACTATGGAGTTGTGAGGCTGTGGGACAAGCGGCAGAGCCATTGCTTACAGAccttctctctgtcctccccGACCAGCAGCCCAGTGTATTGCCTGCGCTTCAACACCACCCATCTGTTTGCCGCCCTGGCCTCTGCTCTCTACGCACTGGATTTCAAAGCCCCCGAACTGCGGGGCAGGAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003334 True 531 mRNA 0.57 4 19863773 19867810

Neighbor

gene id symbol gene type direction distance location
AMCG00003333 NA coding downstream 6907 19850325 ~ 19856866 (-)
AMCG00003335 NA coding downstream 16374 19829188 ~ 19847399 (-)
AMCG00003336 cnnm2,LOC107588659,LOC107673921,LOC107656926,LOC107585325,LOC107716327 coding downstream 101479 19747426 ~ 19762294 (-)
AMCG00003330 LOC106588656,LOC106564629,LOC105012231 coding downstream 156884 19699986 ~ 19706889 (-)
AMCG00003326 LOC106564630,LOC106588642 coding downstream 202124 19656665 ~ 19661649 (-)
AMCG00003338 NA coding upstream 27501 19895311 ~ 19900232 (-)
AMCG00003339 fgf8a,fgf8,LOC107673879,LOC107585369,LOC107716294,LOC107696243 coding upstream 42466 19910276 ~ 19929271 (-)
AMCG00003342 slc2a15a,LOC107716293,LOC107673883,LOC107696166,LOC107708408,LOC108442702,LOC103035008,LOC107585370 coding upstream 127209 19995019 ~ 20005313 (-)
AMCG00003341 fbxw11b,LOC106568099,LOC105893085,LOC107687420,LOC105905987 coding upstream 152048 20019858 ~ 20033589 (-)
AMCG00003344 tlx1,LOC107585374,LOC107588667,LOC107694453 coding upstream 291518 20159328 ~ 20165583 (-)
G142200 NA non-coding downstream 264659 19597329 ~ 19599114 (-)
G142176 NA non-coding downstream 314841 19548641 ~ 19548932 (-)
G142090 NA non-coding downstream 1026288 18835540 ~ 18837485 (-)
G142066 NA non-coding downstream 1557090 18306362 ~ 18306683 (-)
G142064 NA non-coding downstream 1558795 18304631 ~ 18304978 (-)
G142348 NA non-coding upstream 312985 20180795 ~ 20181023 (-)
G142357 NA non-coding upstream 507576 20375386 ~ 20375626 (-)
G142404 NA non-coding upstream 787253 20655063 ~ 20669631 (-)
G142406 NA non-coding upstream 791802 20659612 ~ 20743604 (-)
G142417 NA non-coding upstream 890309 20758119 ~ 20758457 (-)
AMCG00003320 NA other downstream 294158 19543637 ~ 19569615 (-)
G141826 NA other downstream 3115342 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 4722954 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 5189353 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 6433449 13407272 ~ 13430324 (-)

Expression


Co-expression Network