AMCG00003336 (cnnm2,LOC107588659,LOC107673921,LOC107656926,LOC107585325,LOC107716327)


Basic Information

Item Value
gene id AMCG00003336
gene name cnnm2,LOC107588659,LOC107673921,LOC107656926,LOC107585325,LOC107716327
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 19747426 ~ 19762294 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003336
ATGCTAAGGCACAGACTTGCAAAGGAGGGAGAGTGGCCCCACGGTGAGCCAGTCCTGCCCAGTCGGGTGACTATTCCCAGGATTGCTGACTCCCTGGCCTCACCCTCCCAGGGGCTGGCTGCAGGTAAATCCCACCTGGCTATAGTCCAAAGGGTAAACAACGAGGGAGAAGGAGACCCATTCTACGAGGTACTGGGTATCGTAACATTGGAAGATGTAATTGAAGAAATCATCAAATCCGAAATCCTGGATGAGACCGACTTGTATACTGACAACAGGACGAAAAAGAAAGTCACCCATCGGGAGAGGAAGCAGGATTTCTCGGCCTTCAAGCCGACAGACAATGAGATGAAGGTTAAAATATCACCTCAGCTTCTGCTGGCAACCCACCGTTTCCTAGCAACAGGCAAGTTCGGCTTATCACAGTTGGAAATCTCCCAGTGTGCCCTGTGTGGCTGGTGTGGGGTTATTGGGAGGGAGTCAAACAAACGAAAGGGACCAGCAATGGAAGTCCCCTGCTCAGGCTGgagaggtcagaggtcacagcgGGCTGACAGGGTGTCTCTCTCTACAGAGGTGGAGCCCTTCAGCCCCACTCAGATGTCTGAGAAGATCCTCCTGCGGCTCCTCAAGCACCCCAACGTCATCCAGGAGCTCAAATACGATGAGAAGAACAGGAGGACCCCCGAGCACTACCTCTACCATCGCAACAAGCCCGTCGACTACTTCATTCTCATTCTTCAGGGGAAGGTGGAGGTGGAGGCGGGGAAGGAGGGGATGAAGTTTGAAGCTGGGGCTTTCTCCTACTATGGGATGTTGGCTCTGACAGCCTCACCAGttcctctctccctgtctcgtACCTTCGTGGTCAGTAGGGCTGAATCTCTAGCAGGATCTCCAGAGAATAAATCTCCTCCGCGGCCCTGCGGTCTGAATCACTCGGACTCTCTGAACCGCAGTGACCGTATCGATGCCATCACCCCCACGCTGGGCAGCAGCAACAATCAGCTCAACGCCTCCTTCCTGCAGGTCTATGTGCCCGACTACTCAGTCAGAGCCATCACAGACCTGCAGTACATCAAGATCACCCGCCAGCAGTACCAGAACGCTCTGATGGCTTCTCGGATGGACAAAACGCCCCAGTCTTCAGACAGCGAGAACATTAAGATCGAATTGACTCTAACCGAGCTTCATGACGGCTTGCCGGACGAGATGGCAAACCTGCTCAATGAGCAGCAGAACTGCGTTGCACACAACAAATCCAACCACACTATGCACAACGAGGGCTCCATTTAG

Function

symbol description
cnnm2 Predicted to enable magnesium ion transmembrane transporter activity. Acts upstream of or within magnesium ion homeostasis. Located in basolateral plasma membrane and intracellular membrane-bounded organelle. Implicated in renal hypomagnesemia 6.

NR:

description
PREDICTED: metal transporter CNNM2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003336 True 1296 mRNA 0.54 8 19747426 19762294

Neighbor

gene id symbol gene type direction distance location
AMCG00003330 LOC106588656,LOC106564629,LOC105012231 coding downstream 40537 19699986 ~ 19706889 (-)
AMCG00003326 LOC106564630,LOC106588642 coding downstream 85777 19656665 ~ 19661649 (-)
AMCG00003325 NA coding downstream 93272 19633888 ~ 19654154 (-)
AMCG00003318 NA coding downstream 161403 19574925 ~ 19586023 (-)
AMCG00003319 NA coding downstream 259224 19484791 ~ 19488202 (-)
AMCG00003335 NA coding upstream 66894 19829188 ~ 19847399 (-)
AMCG00003333 NA coding upstream 88031 19850325 ~ 19856866 (-)
AMCG00003334 NA coding upstream 101479 19863773 ~ 19867810 (-)
AMCG00003338 NA coding upstream 133017 19895311 ~ 19900232 (-)
AMCG00003339 fgf8a,fgf8,LOC107673879,LOC107585369,LOC107716294,LOC107696243 coding upstream 147982 19910276 ~ 19929271 (-)
G142200 NA non-coding downstream 148312 19597329 ~ 19599114 (-)
G142176 NA non-coding downstream 198494 19548641 ~ 19548932 (-)
G142090 NA non-coding downstream 909941 18835540 ~ 18837485 (-)
G142066 NA non-coding downstream 1440743 18306362 ~ 18306683 (-)
G142064 NA non-coding downstream 1442448 18304631 ~ 18304978 (-)
G142348 NA non-coding upstream 418501 20180795 ~ 20181023 (-)
G142357 NA non-coding upstream 613092 20375386 ~ 20375626 (-)
G142404 NA non-coding upstream 892769 20655063 ~ 20669631 (-)
G142406 NA non-coding upstream 897318 20659612 ~ 20743604 (-)
G142417 NA non-coding upstream 995825 20758119 ~ 20758457 (-)
AMCG00003320 NA other downstream 177811 19543637 ~ 19569615 (-)
G141826 NA other downstream 2998995 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 4606607 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 5073006 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 6317102 13407272 ~ 13430324 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 39785 19802079 ~ 19876762 (-)

Expression


Co-expression Network