AMCG00003347


Basic Information

Item Value
gene id AMCG00003347
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20601752 ~ 20604005 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003347
ATGTACAGCGAGGAGACCTGGGAACTGAAAACTGTTCGCACTCTGGCTCAGAAATCTGGTACCAATGGAAAGGGCAACTGTCCTGCTCTGATGCCAGATTCCATCACTTTAGTGACCCCAAAACAGGTTACTAAGCCAGATAGTGTCCCTCCAGTGGATATACCATTTGTTGGAGGATGCAGAGAGACCATTGGGCAGAAGGCACCATCAAAGCAATTGGTGGTGAAGGAAATTACTGGCGATGTGTATGCAGGGGCTACAGAGGCAGAGCTGATCGTGGAAACCAGTCAAACAGGCCAACAACAGCTCAAAGACCAGACATCTCCACCTCTTAAAGCTCTGCTGACTTTGAATCTTGACCTCTCAGTGGAAGATCCACCTAAATTCCTGGAAGCTCTAACAGAGGAAGAAAATCAGGGACTCATCACCAACTTGAATACCAAGTatgacaaaatgcaaaaaggCTGGGTCCAGATGGACAAAGAGGTGCTGCCAGTTCTTCTCATGGAGTCTACCCCAGTTCTCAAGCTGAGCGCttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003347 True 540 mRNA 0.48 3 20601752 20604005

Neighbor

gene id symbol gene type direction distance location
AMCG00003345 NA coding downstream 239166 20223823 ~ 20362586 (-)
AMCG00003344 tlx1,LOC107585374,LOC107588667,LOC107694453 coding downstream 436169 20159328 ~ 20165583 (-)
AMCG00003341 fbxw11b,LOC106568099,LOC105893085,LOC107687420,LOC105905987 coding downstream 568163 20019858 ~ 20033589 (-)
AMCG00003342 slc2a15a,LOC107716293,LOC107673883,LOC107696166,LOC107708408,LOC108442702,LOC103035008,LOC107585370 coding downstream 596439 19995019 ~ 20005313 (-)
AMCG00003339 fgf8a,fgf8,LOC107673879,LOC107585369,LOC107716294,LOC107696243 coding downstream 672481 19910276 ~ 19929271 (-)
AMCG00003346 NA coding upstream 19398 20623403 ~ 20629596 (-)
AMCG00003350 LOC106532717 coding upstream 172574 20776579 ~ 20796389 (-)
AMCG00003353 NA coding upstream 286746 20890751 ~ 20892570 (-)
AMCG00003354 NA coding upstream 303675 20907680 ~ 20912693 (-)
AMCG00003352 NA coding upstream 338751 20942756 ~ 20945804 (-)
G142357 NA non-coding downstream 226126 20375386 ~ 20375626 (-)
G142348 NA non-coding downstream 420729 20180795 ~ 20181023 (-)
G142200 NA non-coding downstream 1002638 19597329 ~ 19599114 (-)
G142176 NA non-coding downstream 1052820 19548641 ~ 19548932 (-)
G142090 NA non-coding downstream 1764267 18835540 ~ 18837485 (-)
G142404 NA non-coding upstream 51058 20655063 ~ 20669631 (-)
G142406 NA non-coding upstream 55607 20659612 ~ 20743604 (-)
G142417 NA non-coding upstream 154114 20758119 ~ 20758457 (-)
G142418 NA non-coding upstream 160539 20764544 ~ 20766330 (-)
G142420 NA non-coding upstream 163349 20767354 ~ 20767630 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 724990 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1032137 19543637 ~ 19569615 (-)
G141826 NA other downstream 3853321 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5460933 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 5927332 14669415 ~ 14674420 (-)

Expression


Co-expression Network