AMCG00003352


Basic Information

Item Value
gene id AMCG00003352
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20942756 ~ 20945804 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003352
ATGAATCAGTCATACCCCCTTTCCTCTCTTTCCTGCATTCAATACCTCCTGGACTATAATCGCTCCTTGCAGAGTGATGCATCCAATTTCAGCCAGAGTGCTGCACCCCAGCTGCGCATTGGCGTTACACAGCGGGAGCCACCCCACGTGGCAATCCCCATGACAGTGTTCTACAGCCTGCTCTTCACCTTCGGGGTCCTGGCCAATGGGGTGAGTGTTCTCACCCTCCTGACCAACACTCGCATGGCGGTTAGTGCCATGCGCTTCTACCTGCTCAGCCTGGCGCTCTGCGACCTCCTGCAGCTGCTCACCATTCCTGTCACCCTGTACCGCTACTACTGGGAGTACTTCCCCTGGAGGCTGGGTGGCCCTGTCTGCAAGATCTACTTCATGGTGCGGCAGGTTTATTGTGCTACCACCAGCTGGACCATCCTGGCCTTTACCGCCGAGCGCTACGTGGCCATCTGCCATCCCATGAGGTCACTTTCCAGCTTGCAGAGCTCTCATCTGCTTGCTCTCCTGCCCCTGGTGTGGCTCATCTCCCTGGGCACCGCAATACCTTTTGCCCTGGTTTATGGCCAAGCCAGCGCCTGCATCCTGGACTACACCTCCGTCTCCCCAGAGGGGGCCTTCCGGCTGTCCACAGTGTGCGAGCTGACTGAGACAGAACCCTTCCCCATCTACAAGTCTGCCCTTCAAATGCGGGGAGTCCTGTGTTTCCTGGGGCCCCTGCTGGCCATCTTCACCCTCTATGTCTTGATCTTCTGTCACCTGCATCGCAATAGCCGCCAGCGGGAGGCCATGGGGCTGACCAGAACTGTGGCAGCCACCCACATCTCCTCAGCTGCCAAGGTCACTGGGAAGCTGCCATTCTGGGCGGTCGTGGTGGCTTTCTTTCTGTGCAACTTCCCTGACCTGGCCTCCTCCCTGATGCACGTGTATATCGAGATCTGGTCCCCGTCGGTGCACACTCTCTACACTGTGCTCAAGACATACCTGTCTCTGCCACTCTGGTACATCAGCAGTGCCCTGGACCCTGTTCTCTTCTGTATCTCTTCTACCACTTTTCGAGGCGCCTGCAAGAAAACGCTGGGGCCTCTGTTGTCCGTCTGCATTAAGCCATCCATAGGGCCAGGGGCTAGGAGGGTCCAGTGCTGGAGCAAGCAGAGGGCAGCCAGAGAGGGCCAGCTGAGTCGCCGCTCATCCCGGACCCTGAGCACCTCAGGAAGAGAGGCCACTTCGTGTGCCAGCCTGCGGACACAAAGCGGAGAACCCCAGTTCCTCTCCCTGCGTAGCCTTTTCCTGCAGGAGTCTACAAACAGTGGCAAGCAACAGTGGACAGCCACATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003352 True 1350 mRNA 0.58 2 20942756 20945804

Neighbor

gene id symbol gene type direction distance location
AMCG00003354 NA coding downstream 30063 20907680 ~ 20912693 (-)
AMCG00003353 NA coding downstream 50186 20890751 ~ 20892570 (-)
AMCG00003350 LOC106532717 coding downstream 146367 20776579 ~ 20796389 (-)
AMCG00003346 NA coding downstream 313160 20623403 ~ 20629596 (-)
AMCG00003347 NA coding downstream 338751 20601752 ~ 20604005 (-)
AMCG00003355 abcc2,LOC103476915,LOC102299438,LOC101468212 coding upstream 46681 20992485 ~ 20996275 (-)
AMCG00003356 abcc2,LOC102299438,LOC100708777 coding upstream 79653 21025457 ~ 21043333 (-)
AMCG00003358 NA coding upstream 188267 21134071 ~ 21135380 (-)
AMCG00003357 cutc coding upstream 197585 21143389 ~ 21146314 (-)
AMCG00003360 NA coding upstream 252788 21198592 ~ 21251895 (-)
G142440 NA non-coding downstream 127558 20814899 ~ 20815198 (-)
G142439 NA non-coding downstream 129110 20813073 ~ 20813646 (-)
G142433 NA non-coding downstream 132105 20809958 ~ 20810651 (-)
G142421 NA non-coding downstream 170961 20770723 ~ 20771795 (-)
G142420 NA non-coding downstream 175126 20767354 ~ 20767630 (-)
G142531 NA non-coding upstream 230540 21176344 ~ 21213391 (-)
G142533 NA non-coding upstream 301739 21247543 ~ 21248434 (-)
G142549 NA non-coding upstream 505871 21451675 ~ 21459233 (-)
G142570 NA non-coding upstream 816208 21762012 ~ 21762258 (-)
G142661 NA non-coding upstream 1121149 22066953 ~ 22069982 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 1065994 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1373141 19543637 ~ 19569615 (-)
G141826 NA other downstream 4194325 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5801937 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6268336 14669415 ~ 14674420 (-)

Expression


Co-expression Network