AMCG00003353


Basic Information

Item Value
gene id AMCG00003353
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20890751 ~ 20892570 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003353
atgtcttttcTTGCAGACTTTACCTTGTTTGATGAAAAGGGCAACAAAACAGCCCTACCAGATAAAGAGCGTCAGATTGAAGCTCTGCAGCTGCTATTCATGCTGCTCCCTCCCACCAACCGCAGCCTCCTCAAACTCCTGCTGGACTTGCTCTACCAGACTGCTCGACAGCAGGACAAAAACAAGATGTCTGCCTATAATCTGGCCCTCATGTTTGCTCCACACATCCTCTGGCCCAAAAATGTGACACCTAGTGACCTGCAAGAGAATATACATAAGCTGAACAATGGCATGGCATTCCTGGTCAAGCACTCGCAGAAACTATTCCGGGCACCAGTGTATATTCGAGAACACGCCAGGTTGCAATTCTTAGGATCAAAGATCCTCCAGTCAaagGATGATCTAGACCTCTTGGCTTCACCAGGCACCAATGTACTGGTACCATCTAAAAGGAACTGCCTGGGTCCAGCCTCTTGTTCCCAGACTGATGACAGCCAGTATCACACAGAGGAAGCTCTAAAGGAGCTCTTCCACCACGTCAACAACATGCCAGAGTCAGCCAAGAAGAAGAAGTTGATTAGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003353 True 585 mRNA 0.48 4 20890751 20892570

Neighbor

gene id symbol gene type direction distance location
AMCG00003350 LOC106532717 coding downstream 94362 20776579 ~ 20796389 (-)
AMCG00003346 NA coding downstream 261155 20623403 ~ 20629596 (-)
AMCG00003347 NA coding downstream 286746 20601752 ~ 20604005 (-)
AMCG00003345 NA coding downstream 528165 20223823 ~ 20362586 (-)
AMCG00003344 tlx1,LOC107585374,LOC107588667,LOC107694453 coding downstream 725168 20159328 ~ 20165583 (-)
AMCG00003354 NA coding upstream 15110 20907680 ~ 20912693 (-)
AMCG00003352 NA coding upstream 50186 20942756 ~ 20945804 (-)
AMCG00003355 abcc2,LOC103476915,LOC102299438,LOC101468212 coding upstream 99915 20992485 ~ 20996275 (-)
AMCG00003356 abcc2,LOC102299438,LOC100708777 coding upstream 132887 21025457 ~ 21043333 (-)
AMCG00003358 NA coding upstream 241501 21134071 ~ 21135380 (-)
G142440 NA non-coding downstream 75553 20814899 ~ 20815198 (-)
G142439 NA non-coding downstream 77105 20813073 ~ 20813646 (-)
G142433 NA non-coding downstream 80100 20809958 ~ 20810651 (-)
G142421 NA non-coding downstream 118956 20770723 ~ 20771795 (-)
G142420 NA non-coding downstream 123121 20767354 ~ 20767630 (-)
G142531 NA non-coding upstream 283774 21176344 ~ 21213391 (-)
G142533 NA non-coding upstream 354973 21247543 ~ 21248434 (-)
G142549 NA non-coding upstream 559105 21451675 ~ 21459233 (-)
G142570 NA non-coding upstream 869442 21762012 ~ 21762258 (-)
G142661 NA non-coding upstream 1174383 22066953 ~ 22069982 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 1013989 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1321136 19543637 ~ 19569615 (-)
G141826 NA other downstream 4142320 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5749932 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6216331 14669415 ~ 14674420 (-)

Expression


Co-expression Network