AMCG00003354


Basic Information

Item Value
gene id AMCG00003354
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20907680 ~ 20912693 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003354
CACGACACCTGCCCACGGAGCCAGCCAATCATCTTCAACCCAGATTTCTTTGTCGAGAAACTGCGTCATGAGAGGCCAGATGTGTTCACAGAGCTGGTGCTGAGCAATGTCACACGGCTCATTGACCTCCCAGGGACAGAGTTTGCTCAGCTACAGGGGGAGGTAGATCCTAAAATCACCAGTGCGGCCGGCTTTTTCCGCTCCTTCAACTTCCTCAAACGCAAAGaaaAGGGAGTTGTGTTTGGAGCCCAGCTGACTGAAGAAGGGATTGCACAGATATATCAGCTCATCGAGTATCTGCAAAAAATACCTGGAAACAGCATCAGACAGCAAGTTCTGAAAGAGAGCTTGAACAATGGGGTTGAGATTGACCTGGATTCGGGGGAGTACCATCCTAATGACATAGCTACTCTCCTGAAAACCTTCCTTGGGGAACTGCCTGAACCACTGATTACTCACAGGCACTACCACGCTCATCTTAAAATA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K20640 ARHGAP19; Rho GTPase-activating protein 19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003354 True 486 mRNA 0.49 3 20907680 20912693

Neighbor

gene id symbol gene type direction distance location
AMCG00003353 NA coding downstream 15110 20890751 ~ 20892570 (-)
AMCG00003350 LOC106532717 coding downstream 111291 20776579 ~ 20796389 (-)
AMCG00003346 NA coding downstream 278084 20623403 ~ 20629596 (-)
AMCG00003347 NA coding downstream 303675 20601752 ~ 20604005 (-)
AMCG00003345 NA coding downstream 545094 20223823 ~ 20362586 (-)
AMCG00003352 NA coding upstream 30063 20942756 ~ 20945804 (-)
AMCG00003355 abcc2,LOC103476915,LOC102299438,LOC101468212 coding upstream 79792 20992485 ~ 20996275 (-)
AMCG00003356 abcc2,LOC102299438,LOC100708777 coding upstream 112764 21025457 ~ 21043333 (-)
AMCG00003358 NA coding upstream 221378 21134071 ~ 21135380 (-)
AMCG00003357 cutc coding upstream 230696 21143389 ~ 21146314 (-)
G142440 NA non-coding downstream 92482 20814899 ~ 20815198 (-)
G142439 NA non-coding downstream 94034 20813073 ~ 20813646 (-)
G142433 NA non-coding downstream 97029 20809958 ~ 20810651 (-)
G142421 NA non-coding downstream 135885 20770723 ~ 20771795 (-)
G142420 NA non-coding downstream 140050 20767354 ~ 20767630 (-)
G142531 NA non-coding upstream 263651 21176344 ~ 21213391 (-)
G142533 NA non-coding upstream 334850 21247543 ~ 21248434 (-)
G142549 NA non-coding upstream 538982 21451675 ~ 21459233 (-)
G142570 NA non-coding upstream 849319 21762012 ~ 21762258 (-)
G142661 NA non-coding upstream 1154260 22066953 ~ 22069982 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 1030918 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1338065 19543637 ~ 19569615 (-)
G141826 NA other downstream 4159249 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5766861 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6233260 14669415 ~ 14674420 (-)

Expression


Co-expression Network