AMCG00003355 (abcc2,LOC103476915,LOC102299438,LOC101468212)


Basic Information

Item Value
gene id AMCG00003355
gene name abcc2,LOC103476915,LOC102299438,LOC101468212
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20992485 ~ 20996275 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003355
GTGGGCCAGCGGCAGCTCCTGTGTCTGGCCAGGGCTCTGCTCCGGAAATCCCGCATCCTGATCCTGGATGAAGCCACTGCTGCTGTGGATCTAGAGACAGACAACATGATCCAGACAACTATCCGCCAGGAGTTCTCTCACTGCACAGTGCTAACCATTGCTCATCGCCTCCACACCATCATGGACAGCTCCCGggTGATGGTGCTGGAAGCAGGGAAGATAGTGGAGTTTGATTCGCCCAGAGAGCTGCTTCACAGGCATGGCCATTTCTACGCTATGGCCAAGGATGCTGGCCTGACCACAATGGAGAACACAGTGCTC

Function

symbol description
abcc2 Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be integral component of plasma membrane. Predicted to be active in apical plasma membrane. Human ortholog(s) of this gene implicated in bilirubin metabolic disorder (multiple); carcinoma (multiple); drug-induced hepatitis; leukemia (multiple); and non-alcoholic fatty liver disease. Orthologous to human ABCC2 (ATP binding cassette subfamily C member 2).

NR:

description
PREDICTED: canalicular multispecific organic anion transporter 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003355 True 321 mRNA 0.56 2 20992485 20996275

Neighbor

gene id symbol gene type direction distance location
AMCG00003352 NA coding downstream 46681 20942756 ~ 20945804 (-)
AMCG00003354 NA coding downstream 79792 20907680 ~ 20912693 (-)
AMCG00003353 NA coding downstream 99915 20890751 ~ 20892570 (-)
AMCG00003350 LOC106532717 coding downstream 196096 20776579 ~ 20796389 (-)
AMCG00003346 NA coding downstream 362889 20623403 ~ 20629596 (-)
AMCG00003356 abcc2,LOC102299438,LOC100708777 coding upstream 29182 21025457 ~ 21043333 (-)
AMCG00003358 NA coding upstream 137796 21134071 ~ 21135380 (-)
AMCG00003357 cutc coding upstream 147114 21143389 ~ 21146314 (-)
AMCG00003360 NA coding upstream 202317 21198592 ~ 21251895 (-)
AMCG00003364 NA coding upstream 528797 21525072 ~ 21725891 (-)
G142440 NA non-coding downstream 177287 20814899 ~ 20815198 (-)
G142439 NA non-coding downstream 178839 20813073 ~ 20813646 (-)
G142433 NA non-coding downstream 181834 20809958 ~ 20810651 (-)
G142421 NA non-coding downstream 220690 20770723 ~ 20771795 (-)
G142420 NA non-coding downstream 224855 20767354 ~ 20767630 (-)
G142531 NA non-coding upstream 180069 21176344 ~ 21213391 (-)
G142533 NA non-coding upstream 251268 21247543 ~ 21248434 (-)
G142549 NA non-coding upstream 455400 21451675 ~ 21459233 (-)
G142570 NA non-coding upstream 765737 21762012 ~ 21762258 (-)
G142661 NA non-coding upstream 1070678 22066953 ~ 22069982 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 1115723 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1422870 19543637 ~ 19569615 (-)
G141826 NA other downstream 4244054 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5851666 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6318065 14669415 ~ 14674420 (-)

Expression


Co-expression Network