AMCG00003357 (cutc)


Basic Information

Item Value
gene id AMCG00003357
gene name cutc
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 21143389 ~ 21146314 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003357
ATGATCCGGCCAAGGGCGGGGGATTTCCTGTACTCAGACCATGAGGTGGAAGTGATGAAAACAGATATCCACCTGAGTAAGAGCCATGGGGCTGACGGACTGGTTCTGGGGACCCTGACAGAGGACGGTCGTGTCGACACTGAGCTCTGCATGGAACTGCTGGCTGCTTGTCGGCCCCTTCCCGTCACCTTTCACAGAGCCTTCGATATGGTGCATGACCCCATGGTTGCCCTGGAGACGCTGATCTCACTGGGTTTCGAGAGGGTGCTGACAAGTGGCTGTGATGTTTCAGCCCTGGAGGGACTGCCCCTCATCAAACGACTGGTGGAGCAGTTGGAAGTGATGAAAACAGATATCCAACTGAGCAAGAGCCATGGGGCTGACGGACTGGTTCTGGGGACCCTGACAGAGGACGGTTGTGTCGACACTGAGCTCTGCATGGAACTGCTGGGTACAACTGACCGTCTTGCAAAAccatgcagaaaaaaaatcaagccaCCCTCGGTGAATCacttatga

Function

symbol description
cutc Predicted to enable copper ion binding activity. Predicted to be involved in copper ion homeostasis. Orthologous to human CUTC (cutC copper transporter).

NR:

description
PREDICTED: copper homeostasis protein cutC homolog isoform X1

GO:

id name namespace
GO:0055070 copper ion homeostasis biological_process
GO:0005507 copper ion binding molecular_function

KEGG:

id description
K06201 cutC; copper homeostasis protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003357 True 519 mRNA 0.55 4 21143389 21146314

Neighbor

gene id symbol gene type direction distance location
AMCG00003358 NA coding downstream 8009 21134071 ~ 21135380 (-)
AMCG00003356 abcc2,LOC102299438,LOC100708777 coding downstream 100056 21025457 ~ 21043333 (-)
AMCG00003355 abcc2,LOC103476915,LOC102299438,LOC101468212 coding downstream 147114 20992485 ~ 20996275 (-)
AMCG00003352 NA coding downstream 197585 20942756 ~ 20945804 (-)
AMCG00003354 NA coding downstream 230696 20907680 ~ 20912693 (-)
AMCG00003360 NA coding upstream 52278 21198592 ~ 21251895 (-)
AMCG00003364 NA coding upstream 378758 21525072 ~ 21725891 (-)
AMCG00003362 cunh10orf76,lg09h10orf76,LOC107714152,LOC107551381,LOC107588454 coding upstream 596975 21743289 ~ 21753048 (-)
AMCG00003368 pdlim1 coding upstream 620646 21766960 ~ 21775448 (-)
AMCG00003369 NA coding upstream 654716 21801030 ~ 21814784 (-)
G142440 NA non-coding downstream 328191 20814899 ~ 20815198 (-)
G142439 NA non-coding downstream 329743 20813073 ~ 20813646 (-)
G142433 NA non-coding downstream 332738 20809958 ~ 20810651 (-)
G142421 NA non-coding downstream 371594 20770723 ~ 20771795 (-)
G142420 NA non-coding downstream 375759 20767354 ~ 20767630 (-)
G142531 NA non-coding upstream 30030 21176344 ~ 21213391 (-)
G142533 NA non-coding upstream 101229 21247543 ~ 21248434 (-)
G142549 NA non-coding upstream 305361 21451675 ~ 21459233 (-)
G142570 NA non-coding upstream 615698 21762012 ~ 21762258 (-)
G142661 NA non-coding upstream 920639 22066953 ~ 22069982 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 1266627 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1573774 19543637 ~ 19569615 (-)
G141826 NA other downstream 4394958 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 6002570 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6468969 14669415 ~ 14674420 (-)

Expression


Co-expression Network