AMCG00003358


Basic Information

Item Value
gene id AMCG00003358
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 21134071 ~ 21135380 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003358
ATGGTGATTAGTAAACTAAAGCTGACCGCTGCCCATTTCAGCAAGTCAGCTGTTGACAGCTACCTGcttgagaagaaacaaaaactactCAACGTTAAATCGGACAAGCTTATCAATGACTGCTCGACCCGATGGAACAGCACATATGACATGATCGCTCGAGCCCTGGAGCAGAAAGCACTTGTGGCTGCTGTAATCTTTGAAAAGAAGCTGTCTCATCTGGAGTTGACTACAAGTGAATGGGTTCTGATGGAAATGGCCTTCGTGCTACTTAACATGGCAAGCTATTTAGACCCACGATTCCACCGTCTAAACCATTTGTCAgagcaacacaaagcacaagTACGGGCGAAAATATTGTCTGAGTTGACGACTAGAATGGAGGAGTCAAAAGCTGAGTGCGCTGATGTGGTAAAACAACCAGACACAAGAAAAAAGACTGCGCTGTCTGCTATGGGCAACCTGTTCGACAGCGTGTACAGTCAGACCCAGAGCAGTGCAGAACAAGGCGTCAGCGCTTTGGAACATGAGATGGATATGTATGAACGAGAAGCTACGCTACCCGCTGACGAAAACCCTCTCAAGTGGTGGCAAAAATCGTGCAGTATGTATCCACATATTGCACAGCTTGCCAAGATGTACTTGAGCATACCTGGCACATCCGTCAGAGCTGAACATGTGTTTTCATCAGCTGGAAACATTGTCAACAAAAAACGCTCAGCACTTGCTGCAGATCAAGTTGACCATCTGGTGTTTTTGACAAACAATATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003358 True 774 mRNA 0.46 2 21134071 21135380

Neighbor

gene id symbol gene type direction distance location
AMCG00003356 abcc2,LOC102299438,LOC100708777 coding downstream 90738 21025457 ~ 21043333 (-)
AMCG00003355 abcc2,LOC103476915,LOC102299438,LOC101468212 coding downstream 137796 20992485 ~ 20996275 (-)
AMCG00003352 NA coding downstream 188267 20942756 ~ 20945804 (-)
AMCG00003354 NA coding downstream 221378 20907680 ~ 20912693 (-)
AMCG00003353 NA coding downstream 241501 20890751 ~ 20892570 (-)
AMCG00003357 cutc coding upstream 8009 21143389 ~ 21146314 (-)
AMCG00003360 NA coding upstream 63212 21198592 ~ 21251895 (-)
AMCG00003364 NA coding upstream 389692 21525072 ~ 21725891 (-)
AMCG00003362 cunh10orf76,lg09h10orf76,LOC107714152,LOC107551381,LOC107588454 coding upstream 607909 21743289 ~ 21753048 (-)
AMCG00003368 pdlim1 coding upstream 631580 21766960 ~ 21775448 (-)
G142440 NA non-coding downstream 318873 20814899 ~ 20815198 (-)
G142439 NA non-coding downstream 320425 20813073 ~ 20813646 (-)
G142433 NA non-coding downstream 323420 20809958 ~ 20810651 (-)
G142421 NA non-coding downstream 362276 20770723 ~ 20771795 (-)
G142420 NA non-coding downstream 366441 20767354 ~ 20767630 (-)
G142531 NA non-coding upstream 40964 21176344 ~ 21213391 (-)
G142533 NA non-coding upstream 112163 21247543 ~ 21248434 (-)
G142549 NA non-coding upstream 316295 21451675 ~ 21459233 (-)
G142570 NA non-coding upstream 626632 21762012 ~ 21762258 (-)
G142661 NA non-coding upstream 931573 22066953 ~ 22069982 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 1257309 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1564456 19543637 ~ 19569615 (-)
G141826 NA other downstream 4385640 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 5993252 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6459651 14669415 ~ 14674420 (-)

Expression


Co-expression Network