AMCG00003364


Basic Information

Item Value
gene id AMCG00003364
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 21525072 ~ 21725891 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003364
ATGGAGAGCAATGATGAACACAGACTTAACAGTGCCAAGCTGTGCCTGATTATTCTCACCTGTATCGCAGAGCCCATGAGGCACCGGAAGAAAGCTGCAGACAAGAacattccctccagaccccTGGTGTGTGCAGTTCTAGATCTTATGGTGGAGTTTATGGTAACTCATATGATGAAGGACTTTCCTATGGACCTCTACATGCGCTGCATCCAGGTTGTCCACAAGCTCATCTGCTACCAGAAGAAGTGCAGAGTCCGTTTACATTACACATGGAGGGAGCTGTGGTCGGctcTCATCAACCTGCTGAAATTCCTCCTCTCCAATGAGACTTTGTTGTTGACGAAACATAACATCTTCCAGCTGGCGCTGTTGAACCATGACCCGGGATGCGTGACAAAATGGAGTCTCAAGACCAGCCCCGAAGCCAAATTCGACATGAGCCCTCCCCCAAAAAAACCATACCTGGAAACGGCCATAATCAATCACTTCAATCCCAAGATCGAGTCCTACGCTGCCGTGAATCACATATCTCAGCTCTCAGAAGATCAGGGACCTCCCCGGGGTCTGCCACAGTTCACCCTGCTAGAATCGCAGATAGAGCAGGGCAATGTGCTGGAGGTGGTGCGCTCCAACTacgacacactgacactgaagcTGCAGGACGGGCTGGACCAGTACGAGAGGTACTCTGAGCAACCCAAGGAAGCTGCCTTCTTCAAAGAGCTGGTCCGCTCCATCAGCCTCAACGTGCGAAAGAATGTGTCTCTCAACACACTGAGCCAGGATGCCAGAGTGTCACGGGTGGTAAAATTGGCAATAAAATCAACCGACCATGCCACCCCCAAGATTACCCGAGGCGGGGAAGACCTCGACAACCCAATGTTCCCTGTGCAGGCAGgGGCAGTGTATCACTCAGGACCTGGATCGAAGCCGCATCCAGACGGGGAAGGCGGCACTAACAGGACAGAAGTAGCTGTGAGCCGGAAGAACAGCGATGCAGTCGTCTCCGATGGGAAAGTTGATGGCCGCGGTGGTGAAACTACAGGTGCAGCAGCAAGAAACCATGGAGACGCTGGTCCGCAATCTCCAGGCCCAAGCTCCTGCGCCTATCCCTGCTCCAGCCGCATCAAGATAGGGGATGCAAAGAGACACATGCTGAGGGCAGGGCTCCCAGGTGACATGGGCCGGCCAGTGCTGGCTGCTGAGAACCCTGCAGCTCCATTCACTAGTGGGGTGGCGTTGGAGGGGGTGTCTTCTATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003364 True 1266 mRNA 0.54 17 21525072 21725891

Neighbor

gene id symbol gene type direction distance location
AMCG00003360 NA coding downstream 273177 21198592 ~ 21251895 (-)
AMCG00003357 cutc coding downstream 378758 21143389 ~ 21146314 (-)
AMCG00003358 NA coding downstream 389692 21134071 ~ 21135380 (-)
AMCG00003356 abcc2,LOC102299438,LOC100708777 coding downstream 481739 21025457 ~ 21043333 (-)
AMCG00003355 abcc2,LOC103476915,LOC102299438,LOC101468212 coding downstream 528797 20992485 ~ 20996275 (-)
AMCG00003362 cunh10orf76,lg09h10orf76,LOC107714152,LOC107551381,LOC107588454 coding upstream 17398 21743289 ~ 21753048 (-)
AMCG00003368 pdlim1 coding upstream 41069 21766960 ~ 21775448 (-)
AMCG00003369 NA coding upstream 75139 21801030 ~ 21814784 (-)
AMCG00003366 NA coding upstream 92295 21818186 ~ 21866585 (-)
AMCG00003365 NA coding upstream 242814 21968705 ~ 21990420 (-)
G142549 NA non-coding downstream 65839 21451675 ~ 21459233 (-)
G142533 NA non-coding downstream 276638 21247543 ~ 21248434 (-)
G142531 NA non-coding downstream 311681 21176344 ~ 21213391 (-)
G142440 NA non-coding downstream 709874 20814899 ~ 20815198 (-)
G142439 NA non-coding downstream 711426 20813073 ~ 20813646 (-)
G142570 NA non-coding upstream 36121 21762012 ~ 21762258 (-)
G142661 NA non-coding upstream 341062 22066953 ~ 22069982 (-)
G142663 NA non-coding upstream 359027 22084918 ~ 22085191 (-)
G142665 NA non-coding upstream 365810 22091701 ~ 22094628 (-)
G142709 NA non-coding upstream 976691 22702582 ~ 22706511 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 1648310 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 1955457 19543637 ~ 19569615 (-)
G141826 NA other downstream 4776641 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 6384253 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 6850652 14669415 ~ 14674420 (-)

Expression


Co-expression Network