AMCG00003370


Basic Information

Item Value
gene id AMCG00003370
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22046313 ~ 22067314 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003370
ATGGGCAAGGGAAAGGGTAGACTGAAATTTGATGATCTTGAAACAGGAGGTTGTGACAGTGTGACTGACAGCGAAGCAGAGTTGGAGGTGATTCATGCCAGCAGCCAAGTGGTAGTCGAGGTCCCAGCGGAAGATCCACAGCCAACTCCTGAGGACTGTGTTGTTGAAAAGCAGGAGCCTTGTAACACACCTGCTATATCCTCTTATGAGAACTGCATTACCATTCAGCCAGACCGAATACGATGTGGGgcaGAGGTGAAAGTTTACATCATACTGAAATGTAAACTAGACAGTCAGGTAAAAACTGAATTGGAATTTTCATGCAAAGAATGTCCCCCCAAAATAGAACCAGGGGTACTTGAGAATGAATTTACCGTCTCTGCCAAGGCACCTGTCTGCTCAGTGCCTGTAACTTACATCACTGGCATGGAGGACATCAGAAACTACCTTGAAAATGCCACCAACCCAATAGAGTTCATGTGTCAGGCTTTTAAAATCACCACAAACAGTATAGAGTCATTGGACCGCTTATTGACGGAGTCACTGAAGAATAATATGCCTACAACTGGTCTTCATCTCTTTGGAATCAACCAAATTGAACAAGAAAATATGTCAGCATACCAAAGAGAAGAGGAGTTGCCAACACTGCTTCACTTTGCTGCTAAGTATGGACTAAAGAAACTAACAACCAGCCTGTTGCAGTGTCCTGGTGCCTTGCAGGCCTACAGCGTGGCTAACAAATATGGGGACTATCCCAATAATATTGCTGAAAAGTATGGATTCCAAGACTTGCGGCAGTTCATGGATGAGTATGTGGAGACTGCAGATATGCTGAAATCTCATATTAAGGAAACCATCACACAAGGAGAGGATGAAGACATCTATGAGTCCATGTCCAAAGCTTCCACAGACATCCTGATGAAATACTCTCTGAACCCAGGGTGTGATGAGGACATCTATGAGTCAATGATGGAGCTGAACCCTGATTGTTTAGAGGACATATATGAAGACATGGAAAAAGCAGTTCAACAAGCAAATACAGTCCCTGATCCTTTTGCAATGAATCCACAAGAGACCATGCTCCGTAAATTTTTAGAGgGGAAATCTGGGACTGAACAAAAACAGGCGTTAGATGAGGCAGCGGAGGAGTTGGAAGGACAGAGTGAACAGGAAGAAGAAGACCCCTACAAGCTGTGTTTGGAGGATGATGTGTATGATAGTGTGGAGCAGGGGGCCACTGGCCTGCCAGAGATATTCAGCCGTCCACCTGCACCCATACCTAGACCCCCCATCTGCAGTGAGCCAGAAGAAAGAGAAACTTACATTTCCAAAGTGAGACCAGTCAGGGATAGGCCTTCTACAACCACCTATGACCCATTTGCTGGGATGAAGACCCCAGGTCAGAGGCAGCTGATTTCGCTGCAGGAGAAGGTGAAGTTAGGTGTCATCACTGTGGAAGAAGCTGTCGACGAGTTCAGGGATTGGCAGTCTAACCAAAAGAGCAGGTCTGAATCCTTACGGTTCCAGCAGGAAAATCTGAAGAAGTTAAGAGACAGCATTACCAGACgccaaaaagagaaaaacaagaccGaACTAGAGATCACTGCCCCTTATCTTCCTAATCAGAAGGCACCGGTAACTTTGGAGTGTGCTGTTTATGAGCCCAGCCCACGAATGGTAGCTGTCCCACCTTCACCAAATAGACCAATTCATAGGGGCAACTGGCAAACTGGAAGCACCACCAGTACATCAAGTAATGGCAGCAACAGATCAAGCACACGTAGTAACCTCAGCTTCAGCAGTGGAGCAGAAGGGGACAATGAGGACAACTCAGAGTGTTACCCTGGCCCCAGTCCACAACGTGTGATAGAGGGAGCTCCGGGACTGCCCCCCCCCCGAATTCCACCACGACCCTCCAACAGTCCCCCAGTCGCTGATCCATCAACAGAGCCCAGCTCCACCAATCAGAGCTGCCCATCAAAACAGACCACATCCACCTATCATATCTTCCCGTCAGTACAGCCCACCTCCACCAATCAGATCTTCCCGTCAGTACAGCCCACCTCCACCAATCAGATCTTCCCGTCAGTACAGCCCACCTCCACCAATCAGACCCGCCCGTCAACACAGCCCACCTCCACCTGTCCCGCCTGCTCGTCAATACAGCCCACCTCCACCAATCAGACCTGCCCGTCAACACAGCCCACCTCCACCTGTCCCACCTGCTCGTGA

Function

GO: NA

KEGG:

id description
K12230 PIK3AP1, BCAP; phosphoinositide 3-kinase adapter protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003370 True 2232 mRNA 0.49 15 22046313 22067314

Neighbor

gene id symbol gene type direction distance location
AMCG00003363 NA coding upstream 290379 21753346 ~ 21755934 (+)
AMCG00003361 NA coding upstream 297712 21525637 ~ 21748601 (+)
AMCG00003359 NA coding upstream 868783 21151851 ~ 21177530 (+)
AMCG00003351 morn4,LOC107719210 coding upstream 1281628 20760320 ~ 20764685 (+)
AMCG00003348 NA coding upstream 1452813 20492359 ~ 20593500 (+)
AMCG00003371 NA coding downstream 67587 22134901 ~ 22144437 (+)
AMCG00003372 NA coding downstream 256518 22323832 ~ 22487911 (+)
AMCG00003374 NA coding downstream 644578 22711892 ~ 22716708 (+)
G142620 NA non-coding upstream 51639 21991512 ~ 21994674 (+)
G142580 NA non-coding upstream 239653 21801019 ~ 21806660 (+)
G142572 NA non-coding upstream 279769 21766341 ~ 21766544 (+)
G142556 NA non-coding upstream 386535 21574114 ~ 21659778 (+)
G142482 NA non-coding upstream 903182 21103820 ~ 21143131 (+)
G142664 NA non-coding downstream 24387 22091701 ~ 22094748 (+)
G142690 NA non-coding downstream 581626 22648940 ~ 22706530 (+)
G142722 NA non-coding downstream 733538 22800852 ~ 22801060 (+)
G142724 NA non-coding downstream 760787 22828101 ~ 22828463 (+)
G142727 NA non-coding downstream 826534 22893848 ~ 22894101 (+)
AMCG00003324 NA other upstream 2387836 19651176 ~ 19658477 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other upstream 2413163 19618881 ~ 19633150 (+)
G142172 NA other upstream 2509222 19535693 ~ 19537091 (+)
G142078 NA other upstream 3354109 18588574 ~ 18692204 (+)
AMCG00003291 bbip1 other upstream 4320932 17721244 ~ 17725381 (+)

Expression


Co-expression Network