AMCG00003373


Basic Information

Item Value
gene id AMCG00003373
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22104127 ~ 22108082 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003373
ATGGTTTCTCTCTGCATCAACCAGTCTCTAGTGCTGAACTTGGACATTCAAAAGAATATGACGCGTGAAAATCAAGATCCAGGAGGAACAACAAGCAGGAAGAGGGCGATTCTTTTGAGTTTCACTCTTGGAGTGTTTATTCTGTTTGCTGTCATAGGAAACATCCTGGTCATCCTCGCCGTCGCTTGTGACAGACATCTCCGAGTAGTTACTAACTACTTCATCATGAACTTGGCTGTGGCAGACTTGTTACTCAGTACCGCCGTACTCCCTTTTTCTGCGTCCCTTGAAGCTCTGGGCTACTGGGTTTTCGGACGCGTGTTCTGTAACATCTGGGCAGCGGTGGACGTCCTGTGCTGCACAGCTTCCATTCTAAGCCTCTGCCTTATCTCAGTAGACAGATATATTGGCGTGAGTTATCCTTTGAGATACCCGTCGATTATGACTCAAAGGAGAGGCTTCATCACTTTGGCAGGGGTCTGGGTGCTCGCCATAGTTATATCGATCGGTCCGCTTCTGGGGTGGAAGGAACCACATCCTGAGGACGAGAACATCTGCAAGATCACAGAAGAGCCGGGTTATGCCCTGTTCTCTGCGCTAGGGTCTTTTTACGTGCCCTTGGTAGTTATTCTGCTTATGTATTTTCGCGTTTATCTGGCGGCAAAGAGAGAGATCAGATGTTTGTGCTCAGGGACAAAGCGAGAGACACTTGGATCTACAGAAGAAGTCACTTTAAGGATTCATAGAAAGATTTCTACACGGGACAGCAGCTTCAGTAGATCAAATCCGCAGTCCAAAAACAGAAGTCTCAGAAGTTCGCTTTCTTTAAGGATTCAGAAGttttccaaagaaaaaaaggcCGCAAAAACGCTGGGTGTAGTAGTTGGTGGTTTCATTCTCTGCTGGCTCCCTTTTTTCGTTGTTcttcctttagGATCCTTCTACCCTCAGTACAAACCTCCTGAAGCtttgtttaaagtaattttttGGCTGGGTTACTTCAATAGCTGCATTAATCCAATTATATACCCTTGTTTCAGCCAAGATTTCAAAAGAGCTTTTAAAAGGATCCTGAGGGGTCAGTttggaagaaagaagaaaacatttcttgCCCTGCATCACTTTTCATATAAGTCCAGCAGGAAAACAACCATAAGCATCCTTGACTGTGAGCAAAGTAAAGacaacaaacaatacaattctGATCAA

Function

GO: NA

KEGG:

id description
K22790 Octbeta; octopamine receptor beta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003373 True 1209 mRNA 0.44 2 22104127 22108082

Neighbor

gene id symbol gene type direction distance location
AMCG00003367 LOC107084148,LOC107376893,LOC102788851 coding downstream 84113 21994244 ~ 22020014 (-)
AMCG00003365 NA coding downstream 113707 21968705 ~ 21990420 (-)
AMCG00003366 NA coding downstream 237542 21818186 ~ 21866585 (-)
AMCG00003369 NA coding downstream 289343 21801030 ~ 21814784 (-)
AMCG00003368 pdlim1 coding downstream 328679 21766960 ~ 21775448 (-)
AMCG00003375 NA coding upstream 724107 22832189 ~ 22833510 (-)
AMCG00003377 NA coding upstream 872418 22980500 ~ 22985638 (-)
AMCG00003376 NA coding upstream 877590 22985672 ~ 22986067 (-)
G142665 NA non-coding downstream 9499 22091701 ~ 22094628 (-)
G142663 NA non-coding downstream 18936 22084918 ~ 22085191 (-)
G142661 NA non-coding downstream 34145 22066953 ~ 22069982 (-)
G142570 NA non-coding downstream 341869 21762012 ~ 21762258 (-)
G142549 NA non-coding downstream 644894 21451675 ~ 21459233 (-)
G142709 NA non-coding upstream 594500 22702582 ~ 22706511 (-)
G142725 NA non-coding upstream 719990 22828072 ~ 22828460 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other downstream 2227365 19802079 ~ 19876762 (-)
AMCG00003320 NA other downstream 2534512 19543637 ~ 19569615 (-)
G141826 NA other downstream 5355696 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 6963308 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 7429707 14669415 ~ 14674420 (-)

Expression


Co-expression Network