G138282


Basic Information

Item Value
gene id G138282
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 227020 ~ 230780 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173928
AGAGCAGATGCCTTTGGAGCACTTGCTTCCTGTCAGTCACCGCTCTGCCCTATTGCTCTGGCGCAGCAGCGGGGAggagccgagagagagagagagagagacggcccCGTTCCCTGCCTGCCCTGAGTCTGCTGCTCCGGCCCAGCCTGCCTCGTCCCGGGGCCTGTGAGAGCAGACCCTCGCTGCTGCCCGTCCTGCCCTGGACGCTGCTCTCTTGGCTCACTCCTGCCTTTCAGAGGGTCCTTTTCCCAGGATTTATGACGGAGCAGGCAGGAGGGCTGTGGTGAGAAGGACCCACAACTTGTTGCTCTGTGCCTgcctgtctcagtgtgtctgctCTAGCGCTGGCATTTAAAGTGGATTGGCGGTGGATTGCTGGCAGCGCAGTGGATCAGCTGTAGGACGTGGTGCATTAGAGGACTGAGCCGCAGGGTGCTTGGGGAGCTCAGACAGCGAGAAGAGAGACCCTCCCCCCGTCCCCCGAGTCCCAGAGGAGCCCCCGACCATCCCCGCACCC

Function

GO:

id name namespace
GO:0048570 notochord morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173928 True 517 lncRNA 0.63 2 227020 230780

Neighbor

gene id symbol gene type direction distance location
AMCG00002724 NA coding downstream 44497 172793 ~ 182523 (-)
AMCG00002727 NA coding upstream 24169 254949 ~ 261173 (-)
AMCG00002731 NA coding upstream 50034 280814 ~ 292475 (-)
AMCG00002734 NA coding upstream 253122 483902 ~ 484300 (-)
AMCG00002732 wdr11,LOC107664693,LOC107741118,LOC107750394 coding upstream 255056 485836 ~ 513387 (-)
AMCG00002733 NA coding upstream 333880 564660 ~ 579964 (-)
G138303 NA non-coding upstream 71302 302082 ~ 387075 (-)
G138304 NA non-coding upstream 104957 335737 ~ 342518 (-)
G138310 LOC106579428 non-coding upstream 135427 366207 ~ 371624 (-)
G138324 NA non-coding upstream 252444 483224 ~ 483603 (-)
G138352 NA non-coding upstream 516714 747494 ~ 748469 (-)
AMCG00002725 NA other downstream 37683 184121 ~ 189337 (-)
G138245 NA other downstream 80180 144926 ~ 146840 (-)
AMCG00002743 psap other upstream 574980 805760 ~ 821591 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other upstream 690008 920788 ~ 925398 (-)
G138741 NA other upstream 2487428 2718208 ~ 2719419 (-)
AMCG00002828 NA other upstream 3697981 3928761 ~ 3953324 (-)
G138932 NA other upstream 3770870 4001650 ~ 4002804 (-)

Expression


Co-expression Network