G138344


Basic Information

Item Value
gene id G138344
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 648593 ~ 649012 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU174004
tgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaagggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccgggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgaagagacaatttgggaacattcagaaacagactggataggatccttgatcacttagttattaatggacaccaaacgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174004 True 420 lncRNA 0.48 1 648593 649012

Neighbor

gene id symbol gene type direction distance location
AMCG00002730 fgfr2 coding upstream 266163 350764 ~ 382430 (+)
AMCG00002729 NA coding upstream 346329 301750 ~ 302264 (+)
AMCG00002726 ate1 coding upstream 371802 263321 ~ 276791 (+)
AMCG00002723 NA coding upstream 463912 165868 ~ 184681 (+)
AMCG00002720 NA coding upstream 501893 137527 ~ 146700 (+)
AMCG00002739 NA coding downstream 51308 700320 ~ 707201 (+)
AMCG00002736 cdh23 coding downstream 69118 718130 ~ 728487 (+)
AMCG00002735 NA coding downstream 87322 736334 ~ 760207 (+)
AMCG00002741 cdh23,LOC106579432,LOC107679169,LOC107549130 coding downstream 127578 776590 ~ 800016 (+)
AMCG00002740 LOC107702684,LOC107660219 coding downstream 180417 829429 ~ 836163 (+)
G138343 NA non-coding upstream 42666 605715 ~ 605927 (+)
G138334 NA non-coding upstream 137905 509869 ~ 510688 (+)
G138333 NA non-coding upstream 141192 506798 ~ 507401 (+)
G138332 NA non-coding upstream 141883 506358 ~ 506710 (+)
G138329 NA non-coding upstream 153795 494459 ~ 494798 (+)
G138356 NA non-coding downstream 111702 760714 ~ 762195 (+)
G138375 NA non-coding downstream 159044 808056 ~ 808613 (+)
G138376 NA non-coding downstream 159884 808896 ~ 810889 (+)
G138378 NA non-coding downstream 164281 813293 ~ 821565 (+)
G138379 NA non-coding downstream 170314 819326 ~ 841728 (+)
G138387 NA other downstream 245816 894828 ~ 898423 (+)
G138394 NA other downstream 262098 911110 ~ 913532 (+)
AMCG00002748 NA other downstream 276219 925231 ~ 930598 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other downstream 440266 1089278 ~ 1093079 (+)
G138476 NA other downstream 446927 1095939 ~ 1097475 (+)

Expression


Co-expression Network