G138378


Basic Information

Item Value
gene id G138378
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 813293 ~ 821565 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU174044
GGCACGGATTTCGCGGTGGGTTTGTTCCACACGTTCTGCTGGCAGTGGGACACTGCTCCACAGGCGGAGGCCGTCTTCACATTCTGGCACCAGTACGGGGGGCCCTTCACACACTGCTCCTGCCCCAGGAGAGGGGTGGCTGCAGCTGTGGAGATGAAGAGGAGGGTGAGCCACATCACGGCCGCTGGGTGGTGGTGGGTTTGGTGTCGGTGCTGGTTGTGTTGAATCGCTGGGTCGCTGCTCTCGCTTGGgtcgctgctgctgctcctgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174044 True 272 lncRNA 0.63 3 813293 821565

Neighbor

gene id symbol gene type direction distance location
AMCG00002741 cdh23,LOC106579432,LOC107679169,LOC107549130 coding upstream 13277 776590 ~ 800016 (+)
AMCG00002735 NA coding upstream 53086 736334 ~ 760207 (+)
AMCG00002736 cdh23 coding upstream 84806 718130 ~ 728487 (+)
AMCG00002739 NA coding upstream 106092 700320 ~ 707201 (+)
AMCG00002730 fgfr2 coding upstream 430863 350764 ~ 382430 (+)
AMCG00002740 LOC107702684,LOC107660219 coding downstream 7864 829429 ~ 836163 (+)
AMCG00002747 mcu coding downstream 69110 890675 ~ 893192 (+)
AMCG00002746 NA coding downstream 78258 899823 ~ 904354 (+)
AMCG00002753 NA coding downstream 170019 991584 ~ 1008956 (+)
AMCG00002760 NA coding downstream 282183 1103748 ~ 1107546 (+)
G138376 NA non-coding upstream 2404 808896 ~ 810889 (+)
G138375 NA non-coding upstream 4680 808056 ~ 808613 (+)
G138356 NA non-coding upstream 51098 760714 ~ 762195 (+)
G138344 NA non-coding upstream 164281 648593 ~ 649012 (+)
G138343 NA non-coding upstream 207366 605715 ~ 605927 (+)
G138385 NA non-coding downstream 21963 843528 ~ 849673 (+)
G138393 NA non-coding downstream 87822 909387 ~ 911080 (+)
G138399 NA non-coding downstream 116582 938147 ~ 938495 (+)
G138475 NA non-coding downstream 266874 1088439 ~ 1088816 (+)
G138502 NA non-coding downstream 554142 1375707 ~ 1395263 (+)
G138387 NA other downstream 73263 894828 ~ 898423 (+)
G138394 NA other downstream 89545 911110 ~ 913532 (+)
AMCG00002748 NA other downstream 103666 925231 ~ 930598 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other downstream 267713 1089278 ~ 1093079 (+)
G138476 NA other downstream 274374 1095939 ~ 1097475 (+)

Expression


Co-expression Network