G138399


Basic Information

Item Value
gene id G138399
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 938147 ~ 938495 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU174084
GGATATTTAGGCTGCTTGcggatttattatttgaaatcattcaAGAAGGCCTACAGATACCAATCAATTCATTGTTGtacatgaaaataacacacaatgtattattacataaagcAAAAGAGAGAAGAACTGctacaaatacatgttgaacagaaagcattttcctCTGCAACATTGACAATACATTTCaagtagaagagagaagtgcaaCAAATAGCCGATCATAAGTGCCatagaaagcatgttttctattaatgttaactattaataattacatactgTGTTTGAATAGCTGTGTTATtaatgaattatacatttgaaagaatgcaggTTAAGGTTATAAAACGCC

Function

NR:

description
PREDICTED: leukocyte elastase inhibitor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174084 True 349 lncRNA 0.31 1 938147 938495

Neighbor

gene id symbol gene type direction distance location
AMCG00002746 NA coding upstream 33793 899823 ~ 904354 (+)
AMCG00002747 mcu coding upstream 44955 890675 ~ 893192 (+)
AMCG00002740 LOC107702684,LOC107660219 coding upstream 101984 829429 ~ 836163 (+)
AMCG00002741 cdh23,LOC106579432,LOC107679169,LOC107549130 coding upstream 138131 776590 ~ 800016 (+)
AMCG00002735 NA coding upstream 177940 736334 ~ 760207 (+)
AMCG00002753 NA coding downstream 53089 991584 ~ 1008956 (+)
AMCG00002760 NA coding downstream 165253 1103748 ~ 1107546 (+)
AMCG00002761 NA coding downstream 266323 1204818 ~ 1216164 (+)
AMCG00002759 NA coding downstream 312330 1250825 ~ 1265977 (+)
AMCG00002763 ebf3 coding downstream 491496 1429991 ~ 1436902 (+)
G138393 NA non-coding upstream 27067 909387 ~ 911080 (+)
G138385 NA non-coding upstream 88474 843528 ~ 849673 (+)
G138379 NA non-coding upstream 96419 819326 ~ 841728 (+)
G138378 NA non-coding upstream 116582 813293 ~ 821565 (+)
G138376 NA non-coding upstream 127258 808896 ~ 810889 (+)
G138475 NA non-coding downstream 149944 1088439 ~ 1088816 (+)
G138502 NA non-coding downstream 437212 1375707 ~ 1395263 (+)
G138562 NA non-coding downstream 999652 1938147 ~ 1939125 (+)
G138593 NA non-coding downstream 1121882 2060377 ~ 2060604 (+)
G138634 NA non-coding downstream 1523143 2461638 ~ 2463636 (+)
AMCG00002748 NA other upstream 7549 925231 ~ 930598 (+)
G138394 NA other upstream 24615 911110 ~ 913532 (+)
G138387 NA other upstream 39724 894828 ~ 898423 (+)
AMCG00002757 bnip3,LOC107653114,LOC107706607,LOC107753263,LOC106560822,LOC107582186 other downstream 150783 1089278 ~ 1093079 (+)
G138476 NA other downstream 157444 1095939 ~ 1097475 (+)
G138506 NA other downstream 462794 1401289 ~ 1402429 (+)
AMCG00002762 NA other downstream 468116 1406611 ~ 1410088 (+)
AMCG00002784 NA other downstream 1553591 2492086 ~ 2494594 (+)

Expression


Co-expression Network