Gene
RNA
| Item | Value |
|---|---|
| gene id | G138738 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 2714377 ~ 2714688 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174503 | True | 312 | lncRNA | 0.58 | 1 | 2714377 | 2714688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002791 | fam175b | coding | downstream | 43304 | 2660906 ~ 2671073 (-) |
| AMCG00002790 | zranb1 | coding | downstream | 59967 | 2635291 ~ 2654410 (-) |
| AMCG00002785 | edrf1,LOC104964479 | coding | downstream | 222494 | 2480058 ~ 2491883 (-) |
| AMCG00002781 | NA | coding | downstream | 247682 | 2460051 ~ 2466695 (-) |
| AMCG00002783 | NA | coding | downstream | 264236 | 2445929 ~ 2450141 (-) |
| AMCG00002799 | NA | coding | upstream | 33424 | 2748112 ~ 2749307 (-) |
| AMCG00002797 | NA | coding | upstream | 36101 | 2750789 ~ 2751466 (-) |
| AMCG00002798 | NA | coding | upstream | 44186 | 2758874 ~ 2759867 (-) |
| AMCG00002802 | gpr26,LOC107387797,LOC100699461 | coding | upstream | 251306 | 2965994 ~ 2973796 (-) |
| AMCG00002807 | bub3,LOC106575478 | coding | upstream | 401173 | 3115861 ~ 3121097 (-) |
| G138737 | NA | non-coding | downstream | 6302 | 2707869 ~ 2708075 (-) |
| G138720 | NA | non-coding | downstream | 22508 | 2691430 ~ 2691869 (-) |
| G138678 | NA | non-coding | downstream | 212063 | 2502113 ~ 2502314 (-) |
| G138594 | NA | non-coding | downstream | 630280 | 2083898 ~ 2084097 (-) |
| G138559 | NA | non-coding | downstream | 780382 | 1933360 ~ 1933995 (-) |
| G138742 | NA | non-coding | upstream | 5724 | 2720412 ~ 2720704 (-) |
| G138799 | NA | non-coding | upstream | 345873 | 3060561 ~ 3113082 (-) |
| G138873 | NA | non-coding | upstream | 661560 | 3376248 ~ 3378038 (-) |
| G138906 | NA | non-coding | upstream | 1210479 | 3925167 ~ 3928618 (-) |
| G138948 | NA | non-coding | upstream | 1360927 | 4075615 ~ 4076838 (-) |
| AMCG00002752 | p4ha1,LOC107753313,LOC106578992 | other | downstream | 1788979 | 920788 ~ 925398 (-) |
| AMCG00002743 | psap | other | downstream | 1892786 | 805760 ~ 821591 (-) |
| AMCG00002725 | NA | other | downstream | 2525040 | 184121 ~ 189337 (-) |
| G138245 | NA | other | downstream | 2567537 | 144926 ~ 146840 (-) |
| G138741 | NA | other | upstream | 3520 | 2718208 ~ 2719419 (-) |
| AMCG00002828 | NA | other | upstream | 1214073 | 3928761 ~ 3953324 (-) |
| G138932 | NA | other | upstream | 1286962 | 4001650 ~ 4002804 (-) |
| AMCG00002935 | LOC106589936 | other | upstream | 4347785 | 7062473 ~ 7066350 (-) |
| AMCG00002945 | NA | other | upstream | 4634123 | 7348811 ~ 7352821 (-) |
