G138940


Basic Information

Item Value
gene id G138940
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 4024442 ~ 4024745 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU174763
ggGGGTGTCATCGTCTGTGTTCTGACCTGTGATCAGCAATGGGACGAGCGTCCAGCCGGCCAGCAGGGCAGTGCAGTGCTGGGAGGGCGTCCGTGTCAGCGCCAGGGCGTGGCTACAGCCCACACAGGCCAggggcagcagcagctgtgtgAGGGAGAACAGGCCACCGGGGGCGTTGACCTCCGCCCACAGCCCCAGCACCGCCTGGACACCAGAGCCGACCGCCGGCACCAGCAGCTGCTCGCCGCGCCGCAGGGAGAAGGGCTGCAGGGACACGGCGCCCAGAGTCTGCAGCGCCACAGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174763 True 304 lncRNA 0.70 1 4024442 4024745

Neighbor

gene id symbol gene type direction distance location
AMCG00002833 NA coding upstream 2048 4016680 ~ 4022394 (+)
AMCG00002834 NA coding upstream 17969 4000290 ~ 4006473 (+)
AMCG00002827 NA coding upstream 50123 3971112 ~ 3974319 (+)
AMCG00002826 NA coding upstream 313125 3711012 ~ 3711317 (+)
AMCG00002825 grid1b,grid1 coding upstream 316764 3699569 ~ 3707678 (+)
AMCG00002835 LOC108269590,LOC107750875,LOC107583634,LOC107668614 coding downstream 6623 4031368 ~ 4033632 (+)
AMCG00002839 NA coding downstream 12965 4037710 ~ 4041401 (+)
AMCG00002831 NA coding downstream 18848 4043593 ~ 4052584 (+)
AMCG00002832 NA coding downstream 31694 4056439 ~ 4071275 (+)
AMCG00002840 inpp5a,LOC106605012 coding downstream 137781 4162526 ~ 4186873 (+)
G138927 NA non-coding upstream 34094 3989924 ~ 3990348 (+)
G138905 NA non-coding upstream 95788 3925169 ~ 3928654 (+)
G138903 NA non-coding upstream 296711 3727497 ~ 3727731 (+)
G138871 NA non-coding upstream 646415 3376246 ~ 3378027 (+)
G138816 NA non-coding upstream 846832 3172907 ~ 3177610 (+)
G138946 NA non-coding downstream 47536 4072281 ~ 4076788 (+)
G139038 NA non-coding downstream 559120 4583865 ~ 4584167 (+)
G139044 NA non-coding downstream 601912 4626657 ~ 4712825 (+)
G139084 cpeb3 non-coding downstream 773868 4798613 ~ 4802244 (+)
G139170 NA non-coding downstream 1042727 5067472 ~ 5068895 (+)
G138888 grid1,LOC106607602 other upstream 428334 3428689 ~ 3596108 (+)
G138790 bub3,LOC106575478,LOC106577429,LOC107684575 other upstream 908361 3107458 ~ 3116081 (+)
AMCG00002784 NA other upstream 1529848 2492086 ~ 2494594 (+)
AMCG00002762 NA other upstream 2614354 1406611 ~ 1410088 (+)
G138506 NA other upstream 2622013 1401289 ~ 1402429 (+)
G138941 NA other downstream 4779 4029524 ~ 4029924 (+)
G139176 NA other downstream 1071986 5096731 ~ 5098744 (+)
G139492 NA other downstream 2123003 6147748 ~ 6153120 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other downstream 3042110 7066855 ~ 7073538 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 3351942 7376687 ~ 7379487 (+)

Expression


Co-expression Network