G139039



Basic Information


Item Value
gene id G139039
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 4583865 ~ 4584172 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU174884
ctgtgtgttctgacacctttctatcagaaccagcattcactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagccttcgctccccacgtgcatcaatgagccttggctgcccatgaccctgtcaccggttcaccgcttttccttccttggaccacttttgataggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttacgcttg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU174884 True 308 lncRNA 0.53 1 4583865 4584172

Neighbor


gene id symbol gene type direction distance location
AMCG00002843 NA coding downstream 246939 4306326 ~ 4336926 (-)
AMCG00002844 NA coding downstream 285529 4282762 ~ 4298336 (-)
AMCG00002841 nkx6.2,nkx6-2,LOC106576777,LOC106605004,LOC107745024 coding downstream 362804 4219176 ~ 4221061 (-)
AMCG00002838 NA coding downstream 547985 4034370 ~ 4035880 (-)
AMCG00002836 NA coding downstream 553870 4022581 ~ 4029995 (-)
AMCG00002854 NA coding upstream 94535 4678707 ~ 4714306 (-)
AMCG00002855 NA coding upstream 162575 4746747 ~ 4750268 (-)
AMCG00002856 NA coding upstream 166433 4750605 ~ 4754918 (-)
AMCG00002859 cpeb3,LOC106604870 coding upstream 214415 4798587 ~ 4826031 (-)
AMCG00002860 NA coding upstream 253548 4837720 ~ 4847720 (-)
G139029 NA non-coding downstream 72558 4507504 ~ 4511307 (-)
G139028 NA non-coding downstream 87503 4496162 ~ 4496362 (-)
G139027 LOC106576780,LOC103360772 non-coding downstream 88447 4495028 ~ 4495418 (-)
G139026 NA non-coding downstream 107202 4476464 ~ 4476663 (-)
G139025 NA non-coding downstream 117676 4465954 ~ 4466189 (-)
G139249 NA non-coding upstream 812167 5396339 ~ 5396559 (-)
G139496 NA non-coding upstream 1573571 6157743 ~ 6158763 (-)
G139593 LOC100846954,LOC107575789 non-coding upstream 1898095 6482267 ~ 6510125 (-)
G139639 NA non-coding upstream 2417493 7001665 ~ 7073536 (-)
G139668 NA non-coding upstream 2634697 7218869 ~ 7219192 (-)
G138932 NA other downstream 581061 4001650 ~ 4002804 (-)
AMCG00002828 NA other downstream 630541 3928761 ~ 3953324 (-)
G138741 NA other downstream 1864446 2718208 ~ 2719419 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 3658467 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 3762274 805760 ~ 821591 (-)
AMCG00002935 LOC106589936 other upstream 2478301 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 2764639 7348811 ~ 7352821 (-)
AMCG00002970 cj104,anapc16 other upstream 3346994 7931166 ~ 7938241 (-)
G139933 LOC108443181 other upstream 3901189 8485361 ~ 8494596 (-)
G140006 NA other upstream 4262860 8847032 ~ 8847840 (-)

Expression



Co-expression Network