Gene
RNA
| Item | Value |
|---|---|
| gene id | G139249 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 5396339 ~ 5396559 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019825 | oxygen binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU175135 | True | 221 | lncRNA | 0.35 | 1 | 5396339 | 5396559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002877 | NA | coding | downstream | 16781 | 5366815 ~ 5379558 (-) |
| AMCG00002878 | arid5b | coding | downstream | 41352 | 5347443 ~ 5354987 (-) |
| AMCG00002879 | arid5b,LOC106577140,LOC102237181,LOC102783177 | coding | downstream | 81170 | 5304911 ~ 5315169 (-) |
| AMCG00002876 | NA | coding | downstream | 99137 | 5289680 ~ 5297202 (-) |
| AMCG00002875 | NA | coding | downstream | 120264 | 5262750 ~ 5276075 (-) |
| AMCG00002883 | cdk1,LOC106607826,LOC107671106 | coding | upstream | 41821 | 5438380 ~ 5443809 (-) |
| AMCG00002890 | NA | coding | upstream | 199798 | 5596357 ~ 5597064 (-) |
| AMCG00002893 | NA | coding | upstream | 273553 | 5670112 ~ 5671942 (-) |
| AMCG00002894 | NA | coding | upstream | 299650 | 5696209 ~ 5712088 (-) |
| AMCG00002899 | NA | coding | upstream | 413579 | 5810138 ~ 5826278 (-) |
| G139039 | NA | non-coding | downstream | 812167 | 4583865 ~ 4584172 (-) |
| G139029 | NA | non-coding | downstream | 885032 | 4507504 ~ 4511307 (-) |
| G139028 | NA | non-coding | downstream | 899977 | 4496162 ~ 4496362 (-) |
| G139027 | LOC106576780,LOC103360772 | non-coding | downstream | 900921 | 4495028 ~ 4495418 (-) |
| G139026 | NA | non-coding | downstream | 919676 | 4476464 ~ 4476663 (-) |
| G139496 | NA | non-coding | upstream | 761184 | 6157743 ~ 6158763 (-) |
| G139593 | LOC100846954,LOC107575789 | non-coding | upstream | 1085708 | 6482267 ~ 6510125 (-) |
| G139639 | NA | non-coding | upstream | 1605106 | 7001665 ~ 7073536 (-) |
| G139668 | NA | non-coding | upstream | 1822310 | 7218869 ~ 7219192 (-) |
| G139752 | NA | non-coding | upstream | 2058985 | 7455544 ~ 7458491 (-) |
| G138932 | NA | other | downstream | 1393535 | 4001650 ~ 4002804 (-) |
| AMCG00002828 | NA | other | downstream | 1443015 | 3928761 ~ 3953324 (-) |
| G138741 | NA | other | downstream | 2676920 | 2718208 ~ 2719419 (-) |
| AMCG00002752 | p4ha1,LOC107753313,LOC106578992 | other | downstream | 4470941 | 920788 ~ 925398 (-) |
| AMCG00002743 | psap | other | downstream | 4574748 | 805760 ~ 821591 (-) |
| AMCG00002935 | LOC106589936 | other | upstream | 1665914 | 7062473 ~ 7066350 (-) |
| AMCG00002945 | NA | other | upstream | 1952252 | 7348811 ~ 7352821 (-) |
| AMCG00002970 | cj104,anapc16 | other | upstream | 2534607 | 7931166 ~ 7938241 (-) |
| G139933 | LOC108443181 | other | upstream | 3088802 | 8485361 ~ 8494596 (-) |
| G140006 | NA | other | upstream | 3450473 | 8847032 ~ 8847840 (-) |
