G139656


Basic Information

Item Value
gene id G139656
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 7152537 ~ 7152739 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU175640
TTACAACACGGTGAGATGAATGATGGGTGGTTGAAGGAAATATGTACTGCATGGTACATTTATAGCAGTGCTTATCTTTCCCTCAACTTCTCTCTTGAATCTAGAGATAAAGCCTCTGCGTTATCTTAAATCCAACTTGTATTTCTATGTTGTCAAATTGATTAACCTTCTGGGAAGAGATGGTAatactgtggagtagtggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175640 True 203 lncRNA 0.38 1 7152537 7152739

Neighbor

gene id symbol gene type direction distance location
AMCG00002937 bicc1,bicc1b,LOC107653928,LOC107695510,LOC107596591 coding upstream 373 7132176 ~ 7152164 (+)
AMCG00002938 NA coding upstream 75310 7075274 ~ 7077227 (+)
AMCG00002931 NA coding upstream 571507 6578983 ~ 6581030 (+)
AMCG00002929 LOC106578950,LOC106589397 coding upstream 577266 6556470 ~ 6575271 (+)
AMCG00002930 prkg1,prkg1b,LOC107708873,LOC107695529,LOC106589397 coding upstream 688261 6463713 ~ 6464276 (+)
AMCG00002940 phyhiplb,phyhipl,LOC107654056,LOC107746456,LOC107695536,LOC107727060 coding downstream 13779 7166518 ~ 7189805 (+)
AMCG00002943 NA coding downstream 73050 7225789 ~ 7267878 (+)
AMCG00002944 NA coding downstream 119188 7271927 ~ 7310924 (+)
AMCG00002942 ogdhl,LOC107707496,LOC107683740 coding downstream 161203 7313942 ~ 7346948 (+)
AMCG00002946 LOC108442250 coding downstream 259370 7412109 ~ 7425081 (+)
G139633 NA non-coding upstream 86163 7062523 ~ 7066374 (+)
G139572 a1cf,LOC107708930,LOC107695528,LOC107654048,LOC107739758 non-coding upstream 729369 6420166 ~ 6423168 (+)
G139573 NA non-coding upstream 733739 6418438 ~ 6418798 (+)
G139531 NA non-coding upstream 841267 6297734 ~ 6311270 (+)
G139507 NA non-coding upstream 949478 6202844 ~ 6203059 (+)
G139667 NA non-coding downstream 44139 7196878 ~ 7197097 (+)
G139827 NA non-coding downstream 800387 7953126 ~ 7953340 (+)
G139832 NA non-coding downstream 845474 7998213 ~ 7999259 (+)
G139836 NA non-coding downstream 850063 8002802 ~ 8003057 (+)
G139837 NA non-coding downstream 850576 8003315 ~ 8003645 (+)
AMCG00002939 ube2d1,ube2d1b,LOC105891213,LOC106607701,LOC103397267,LOC103397347,LOC105010549,LOC107717106,LOC107553913,LOC107733527 other upstream 78999 7066855 ~ 7073538 (+)
G139492 NA other upstream 999417 6147748 ~ 6153120 (+)
G139176 NA other upstream 2053793 5096731 ~ 5098744 (+)
G138941 NA other upstream 3122613 4029524 ~ 4029924 (+)
G138888 grid1,LOC106607602 other upstream 3556429 3428689 ~ 3596108 (+)
G139720 LOC103376252,LOC104927182,LOC102078543,LOC101474510 other downstream 223948 7376687 ~ 7379487 (+)
AMCG00002960 NA other downstream 756513 7909252 ~ 7920908 (+)
G139784 NA other downstream 770443 7923182 ~ 7926832 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other downstream 884838 8037577 ~ 8044413 (+)
AMCG00002982 NA other downstream 1340266 8493005 ~ 8496965 (+)

Expression


Co-expression Network