G139752


Basic Information

Item Value
gene id G139752
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 7455544 ~ 7458491 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU175760
ATCCAGGTTTGAAGGGCGCAGCATTGGTTTTGGAAAGAGAAATGCTATATCCATCAATCAGAAGTGCCCGGCTACGCCATAAACGAAAACTGAGTAGATAACTGTAAGTTGCCGTAAAGTTCAGAGTTTTGCTGGCACTCCACTTGACAACATGAGGAAGCACACTCTCTTAGCCCTGGGGCTGCTGCTGATACTTTGTGTCGCTGTACTTTCCTCTGATGcacGTAAAGCCAGAGCTGCTTGCAGGTGTTTTCTGAAACATCATGTGAAACATCCTAAAGGAAACTACAGACACAAGAAGCTCTGCAAGAGTCCCTTTTCCTGCAGAAAACACTACCCGAACCTCCCGAACATCCCGATCCCTTCTGAATAATCCGCTCCTCCAAGCTTGTCTCACAGAGTTGGAAATGGATGGACAACATTTAAGGCAGAAAAACCCTTGCTTGATGTTTAATCCTGTTAACTTGCAAAATTAGACTACTGCTGATGcaattaaatactgtacaaccaaatgtcaaaaatatacttaacttaaaaatacttaacttaaacataaaaaataatgtgccATAGGGGATGTCTTGTGATCTTTATTCTGACCACAACAAAGATGTAATGTGTACAGTGATAAAGATGACAATTTTTGTGTACTGGATGAGATTATTCAAGCTCTTAAAATGGCTTCTACATGAACATTTCACACACCATCATGTTGCTTTTTAAGTAGTAAATGATTATAACTGTATCTTGGTAATGTAATGCCAGTCCAAGAGACTCCTAAAGCTATGCAATGCTGTGCTGTTATGTTGCTTTGCTAGTTGCATAAACCTCTTTTTAATgcactgaattaaatacatcagcATGTTTAATATCCTTATGTCTTTATATCTGTGCGTGTTTGCCCAGTGCACTTGGACCTATATAACACACCCGCAGTACCCTTGTTCAAAACCCAGCATATTTATACATCTTTGATGTCATGACAAATATGGgttgtttaaatgtgtaattcaaagatgtatgtaaaaaattgtaaaacaaacctCAATACAAATTACACGTAACTACACAcataatagtaaaacaaaactagttggaggaggaggaagataaTTCAATCGGCAATTAACTGTTTTAAGAATTGCCCTGCATACAAACAGATGAAGAAAGGATTACAGTAGGTTAATCTTCTTGTCCGCCAACTGCCCGTTCCActaaaattaaaccagaaaCCAGGGCACTGTTGACAGATGTTTACATCTGTAAATTGGCAGgtgctttataaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175760 True 1290 lncRNA 0.38 4 7455544 7458491

Neighbor

gene id symbol gene type direction distance location
AMCG00002951 NA coding downstream 8972 7434251 ~ 7446572 (-)
AMCG00002947 NA coding downstream 48026 7402581 ~ 7407518 (-)
AMCG00002948 chat,LOC107588646,LOC107683741,LOC107707518,LOC108245700 coding downstream 83931 7363052 ~ 7371613 (-)
AMCG00002941 NA coding downstream 257555 7189337 ~ 7197989 (-)
AMCG00002936 NA coding downstream 373921 7077934 ~ 7081623 (-)
AMCG00002950 ghitm coding upstream 1441 7459932 ~ 7468014 (-)
AMCG00002956 fbx37,fbxl15 coding upstream 359270 7817761 ~ 7826227 (-)
AMCG00002958 hif1an,fih1,LOC106577208 coding upstream 374600 7833091 ~ 7843208 (-)
AMCG00002957 wnt8b,LOC103355142,LOC102196387 coding upstream 411110 7869601 ~ 7873602 (-)
AMCG00002963 scd,LOC107659656,LOC103362465,LOC107715223,LOC108246230 coding upstream 436862 7895353 ~ 7901361 (-)
G139668 NA non-coding downstream 236352 7218869 ~ 7219192 (-)
G139639 NA non-coding downstream 382008 7001665 ~ 7073536 (-)
G139593 LOC100846954,LOC107575789 non-coding downstream 945419 6482267 ~ 6510125 (-)
G139496 NA non-coding downstream 1296781 6157743 ~ 6158763 (-)
G139249 NA non-coding downstream 2058985 5396339 ~ 5396559 (-)
G139825 NA non-coding upstream 487561 7946052 ~ 7946521 (-)
G139867 NA non-coding upstream 652534 8111025 ~ 8115245 (-)
G139881 NA non-coding upstream 722799 8181290 ~ 8181576 (-)
G139902 rps24,LOC106591086 non-coding upstream 771878 8230369 ~ 8234284 (-)
G139937 NA non-coding upstream 1036363 8494854 ~ 8495297 (-)
AMCG00002945 NA other downstream 102723 7348811 ~ 7352821 (-)
AMCG00002935 LOC106589936 other downstream 389194 7062473 ~ 7066350 (-)
G138932 NA other downstream 3452740 4001650 ~ 4002804 (-)
AMCG00002828 NA other downstream 3502220 3928761 ~ 3953324 (-)
G138741 NA other downstream 4736125 2718208 ~ 2719419 (-)
AMCG00002970 cj104,anapc16 other upstream 472675 7931166 ~ 7938241 (-)
G139933 LOC108443181 other upstream 1026870 8485361 ~ 8494596 (-)
G140006 NA other upstream 1388541 8847032 ~ 8847840 (-)
G140015 NA other upstream 1778167 9236658 ~ 9237730 (-)
AMCG00003017 NA other upstream 2138452 9596943 ~ 9607316 (-)

Expression


Co-expression Network