Item | Value |
---|---|
gene id | G139937 |
gene name | NA |
gene type | non-coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030139.1 |
NCBI id | CM030139.1 |
chromosome length | 23121578 |
location | 8494854 ~ 8495297 (-) |
genome version | AmiCal1_2021_bowfin_Genome |
id | name | namespace |
---|---|---|
GO:0043603 | cellular amide metabolic process | biological_process |
GO:0043604 | amide biosynthetic process | biological_process |
GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
GO:0009059 | macromolecule biosynthetic process | biological_process |
GO:0043043 | peptide biosynthetic process | biological_process |
GO:0006412 | translation | biological_process |
GO:0010467 | gene expression | biological_process |
GO:0044267 | cellular protein metabolic process | biological_process |
GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
GO:0006518 | peptide metabolic process | biological_process |
GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
GO:0005739 | mitochondrion | cellular_component |
GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
GO:0009055 | electron transfer activity | molecular_function |
GO:0003954 | NADH dehydrogenase activity | molecular_function |
GO:0016491 | oxidoreductase activity | molecular_function |
GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
GO:0015002 | heme-copper terminal oxidase activity | molecular_function |
GO:0015078 | proton transmembrane transporter activity | molecular_function |
GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
GO:0004129 | cytochrome-c oxidase activity | molecular_function |
GO:0016675 | oxidoreductase activity, acting on a heme group of donors | molecular_function |
GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU176008 | True | 352 | lncRNA | 0.38 | 2 | 8494854 | 8495297 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00002979 | polr3a | coding | downstream | 265725 | 8214896 ~ 8229129 (-) |
AMCG00002980 | NA | coding | downstream | 291540 | 8198676 ~ 8203314 (-) |
AMCG00002978 | NA | coding | downstream | 298962 | 8183455 ~ 8195892 (-) |
AMCG00002981 | NA | coding | downstream | 317961 | 8174912 ~ 8176893 (-) |
AMCG00002975 | NA | coding | downstream | 446420 | 8045215 ~ 8048434 (-) |
AMCG00002986 | zcchc24,LOC108245402,LOC104967378,LOC105029870,LOC103133498 | coding | upstream | 10392 | 8505689 ~ 8508352 (-) |
AMCG00002985 | zcchc24,LOC107564348,LOC106577169 | coding | upstream | 33898 | 8529195 ~ 8542960 (-) |
AMCG00002987 | NA | coding | upstream | 74921 | 8570218 ~ 8570907 (-) |
AMCG00002988 | NA | coding | upstream | 76291 | 8571588 ~ 8580373 (-) |
AMCG00002993 | NA | coding | upstream | 415138 | 8910435 ~ 8967149 (-) |
G139902 | rps24,LOC106591086 | non-coding | downstream | 260570 | 8230369 ~ 8234284 (-) |
G139881 | NA | non-coding | downstream | 313278 | 8181290 ~ 8181576 (-) |
G139867 | NA | non-coding | downstream | 379609 | 8111025 ~ 8115245 (-) |
G139825 | NA | non-coding | downstream | 548333 | 7946052 ~ 7946521 (-) |
G139752 | NA | non-coding | downstream | 1036363 | 7455544 ~ 7458491 (-) |
G139960 | dlg5 | non-coding | upstream | 122138 | 8617435 ~ 8618101 (-) |
G140005 | NA | non-coding | upstream | 354372 | 8849669 ~ 8850559 (-) |
G140007 | NA | non-coding | upstream | 437473 | 8932770 ~ 8932969 (-) |
G140009 | znf503,LOC107708443,LOC101070189 | non-coding | upstream | 655519 | 9150816 ~ 9156562 (-) |
G140014 | NA | non-coding | upstream | 740725 | 9236022 ~ 9236302 (-) |
G139933 | LOC108443181 | other | downstream | 258 | 8485361 ~ 8494596 (-) |
AMCG00002970 | cj104,anapc16 | other | downstream | 556613 | 7931166 ~ 7938241 (-) |
AMCG00002945 | NA | other | downstream | 1142033 | 7348811 ~ 7352821 (-) |
AMCG00002935 | LOC106589936 | other | downstream | 1428504 | 7062473 ~ 7066350 (-) |
G138932 | NA | other | downstream | 4492050 | 4001650 ~ 4002804 (-) |
G140006 | NA | other | upstream | 351735 | 8847032 ~ 8847840 (-) |
G140015 | NA | other | upstream | 741361 | 9236658 ~ 9237730 (-) |
AMCG00003017 | NA | other | upstream | 1101646 | 9596943 ~ 9607316 (-) |
AMCG00003049 | NA | other | upstream | 1806503 | 10301800 ~ 10331372 (-) |
AMCG00003110 | LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 | other | upstream | 3113166 | 11608463 ~ 11622649 (-) |