G140006


Basic Information

Item Value
gene id G140006
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 8847032 ~ 8847840 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176103
TCCTCTCGAGGGACTCCCCACTGTGCACGAGACTgcggctcctcctcctcccatgcATCTGGATGACGGTGCTGCATATGCGGTGCTCTCCCTGCTCCATTCCCGTCTCCTCTGGGGCTGCCTGCAATATTTGGTGGACTGGGAGGGTTGCGGTCCAGAGGAGCGCTCCTGGGTTCCGGACTCCGATGTGCTCGACCCATCTCTCATCACGGACTTCCATTCTGCCCATCCCTCTGcacctgctcctcggccccATGGTCGTCCCCGCCCTGTCCAGTCAGGTTTGGCTATGGCTGATCGCGGAGGGTGGGGGTAATGTCACggccacagaccagcactcttctcccaatccaagcacttccacttttgcccactagatgtcaccatcaaccTTCCATACCAGTCACTTTTCCCAGCccccttcattcaatcaatcaatcaatcaacattcctgaacaccatatgcacttgttcaatcaccctctgacCCCATTCACCAtgcacctcccaaacctggttccttgcttccctctggtccCCATATAAACCACTTACTGTCTGTCACTAGTTGCGAAGTTTTGTTAGTGTAAACTACATTTTCGAGCTGTCTCCCCATGCCTTGTTTAGCCTTGAATCTAGTGTGTATCCTTGACCTCACACTTGACTTCCCAACCACGACTTTGCTCTTCTcctgattgcctgtttgcctgattgccTGACCCTTGCCCGTGACCACGACTACGTATTTGCCTTGCCTTGATTGtactgtcctgccggtatccgaCCCCCGCCTGTCTTGACGATCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176103 True 809 TUCP 0.55 1 8847032 8847840

Neighbor

gene id symbol gene type direction distance location
AMCG00002988 NA coding downstream 266659 8571588 ~ 8580373 (-)
AMCG00002987 NA coding downstream 276125 8570218 ~ 8570907 (-)
AMCG00002985 zcchc24,LOC107564348,LOC106577169 coding downstream 304072 8529195 ~ 8542960 (-)
AMCG00002986 zcchc24,LOC108245402,LOC104967378,LOC105029870,LOC103133498 coding downstream 338680 8505689 ~ 8508352 (-)
AMCG00002979 polr3a coding downstream 617903 8214896 ~ 8229129 (-)
AMCG00002993 NA coding upstream 62595 8910435 ~ 8967149 (-)
AMCG00003001 vdac2,LOC108444242,LOC107747461,LOC107582506,LOC107690181 coding upstream 426373 9274213 ~ 9281237 (-)
AMCG00002999 samd8 coding upstream 436709 9284549 ~ 9298719 (-)
AMCG00003000 kat6b,LOC102792766 coding upstream 477619 9325459 ~ 9346898 (-)
AMCG00003006 adka coding upstream 523533 9371373 ~ 9384002 (-)
G139960 dlg5 non-coding downstream 228931 8617435 ~ 8618101 (-)
G139937 NA non-coding downstream 351735 8494854 ~ 8495297 (-)
G139902 rps24,LOC106591086 non-coding downstream 612748 8230369 ~ 8234284 (-)
G139881 NA non-coding downstream 665456 8181290 ~ 8181576 (-)
G139867 NA non-coding downstream 731787 8111025 ~ 8115245 (-)
G140005 NA non-coding upstream 1829 8849669 ~ 8850559 (-)
G140007 NA non-coding upstream 84930 8932770 ~ 8932969 (-)
G140009 znf503,LOC107708443,LOC101070189 non-coding upstream 302976 9150816 ~ 9156562 (-)
G140014 NA non-coding upstream 388182 9236022 ~ 9236302 (-)
G140016 NA non-coding upstream 390028 9237868 ~ 9242987 (-)
G139933 LOC108443181 other downstream 352436 8485361 ~ 8494596 (-)
AMCG00002970 cj104,anapc16 other downstream 908791 7931166 ~ 7938241 (-)
AMCG00002945 NA other downstream 1494211 7348811 ~ 7352821 (-)
AMCG00002935 LOC106589936 other downstream 1780682 7062473 ~ 7066350 (-)
G138932 NA other downstream 4844228 4001650 ~ 4002804 (-)
G140015 NA other upstream 388818 9236658 ~ 9237730 (-)
AMCG00003017 NA other upstream 749103 9596943 ~ 9607316 (-)
AMCG00003049 NA other upstream 1453960 10301800 ~ 10331372 (-)
AMCG00003110 LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 other upstream 2760623 11608463 ~ 11622649 (-)
G140758 NA other upstream 2792976 11640816 ~ 11647619 (-)

Expression


Co-expression Network