G140007


Basic Information

Item Value
gene id G140007
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 8932770 ~ 8932969 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176104
ttttttgaacatgcaactgcagctgtagatcacgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaagtagatggattatgaactggttgatgtctaggaaacagagggtgtcgattagaggagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176104 True 200 lncRNA 0.39 1 8932770 8932969

Neighbor

gene id symbol gene type direction distance location
AMCG00002988 NA coding downstream 352397 8571588 ~ 8580373 (-)
AMCG00002987 NA coding downstream 361863 8570218 ~ 8570907 (-)
AMCG00002985 zcchc24,LOC107564348,LOC106577169 coding downstream 389810 8529195 ~ 8542960 (-)
AMCG00002986 zcchc24,LOC108245402,LOC104967378,LOC105029870,LOC103133498 coding downstream 424418 8505689 ~ 8508352 (-)
AMCG00002979 polr3a coding downstream 703641 8214896 ~ 8229129 (-)
AMCG00003001 vdac2,LOC108444242,LOC107747461,LOC107582506,LOC107690181 coding upstream 341244 9274213 ~ 9281237 (-)
AMCG00002999 samd8 coding upstream 351580 9284549 ~ 9298719 (-)
AMCG00003000 kat6b,LOC102792766 coding upstream 392490 9325459 ~ 9346898 (-)
AMCG00003006 adka coding upstream 438404 9371373 ~ 9384002 (-)
AMCG00003003 LOC103355368,LOC107084594,LOC107666490,LOC107601874 coding upstream 501091 9434060 ~ 9440740 (-)
G140005 NA non-coding downstream 82211 8849669 ~ 8850559 (-)
G139960 dlg5 non-coding downstream 314669 8617435 ~ 8618101 (-)
G139937 NA non-coding downstream 437473 8494854 ~ 8495297 (-)
G139902 rps24,LOC106591086 non-coding downstream 698486 8230369 ~ 8234284 (-)
G139881 NA non-coding downstream 751194 8181290 ~ 8181576 (-)
G140009 znf503,LOC107708443,LOC101070189 non-coding upstream 217847 9150816 ~ 9156562 (-)
G140014 NA non-coding upstream 303053 9236022 ~ 9236302 (-)
G140016 NA non-coding upstream 304899 9237868 ~ 9242987 (-)
G140093 NA non-coding upstream 607375 9540344 ~ 9540553 (-)
G140174 NA non-coding upstream 807685 9740654 ~ 9740940 (-)
G140006 NA other downstream 84930 8847032 ~ 8847840 (-)
G139933 LOC108443181 other downstream 438174 8485361 ~ 8494596 (-)
AMCG00002970 cj104,anapc16 other downstream 994529 7931166 ~ 7938241 (-)
AMCG00002945 NA other downstream 1579949 7348811 ~ 7352821 (-)
AMCG00002935 LOC106589936 other downstream 1866420 7062473 ~ 7066350 (-)
G140015 NA other upstream 303689 9236658 ~ 9237730 (-)
AMCG00003017 NA other upstream 663974 9596943 ~ 9607316 (-)
AMCG00003049 NA other upstream 1368831 10301800 ~ 10331372 (-)
AMCG00003110 LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 other upstream 2675494 11608463 ~ 11622649 (-)
G140758 NA other upstream 2707847 11640816 ~ 11647619 (-)

Expression


Co-expression Network