G140188


Basic Information

Item Value
gene id G140188
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 9767086 ~ 9773065 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176316
GTCCTTTAGTTAACTTAGTGTTTTTTCAATGTGATTAGGAAAAACAAGTGTTAAATAAGTGTGAGGGTaaaagaatatattaaatatgataatgctgctgaaatacattaagatatataataaaaaaggtaGGTGTGATTTATATTTGGCTTTTGTCAACCAAAGCACATTTTACTCACCTGTTGAACCCCATCTGATCTAATCTCCAAGGTCCAGTGCAAGAGAAATGAATTCGCTCATTATCATCATGCATCTGAAGTCGGATTGGTCTCCTGAGACCCCAGGAGATGTTAAGTAAACCTTCGATGATTAATTCGCCTTCCTCCTGCTCTCGACTGTGCAGCTGGAAATGTTTCCCTTCATGGTaacaattatatgttttcaACAGGGACAACAGATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176316 True 402 lncRNA 0.37 2 9767086 9773065

Neighbor

gene id symbol gene type direction distance location
AMCG00003018 NA coding upstream 24247 9742438 ~ 9742839 (+)
AMCG00003007 NA coding upstream 133728 9629812 ~ 9633358 (+)
AMCG00003009 LOC108263345,LOC107725471,LOC107666491,LOC107601865,LOC108426813 coding upstream 183201 9579599 ~ 9583885 (+)
AMCG00003008 NA coding upstream 191451 9562280 ~ 9575635 (+)
AMCG00003002 LOC108426803,LOC107743512,LOC107726964,LOC107655430,LOC107559324,LOC107601875 coding upstream 258789 9494051 ~ 9508297 (+)
AMCG00003020 NA coding downstream 128202 9901267 ~ 9920544 (+)
AMCG00003023 LOC107552681 coding downstream 150616 9923681 ~ 9926024 (+)
AMCG00003024 drgx,LOC107548637,LOC107673892,LOC107588616,LOC107708289,LOC107668808 coding downstream 156374 9929439 ~ 9937381 (+)
AMCG00003026 NA coding downstream 192891 9965956 ~ 9976662 (+)
AMCG00003025 NA coding downstream 223501 9996566 ~ 9997258 (+)
G140156 NA non-coding upstream 36223 9730648 ~ 9730863 (+)
G140002 NA non-coding upstream 620514 9146301 ~ 9146572 (+)
G139999 c3h10orf11,c13h10orf11,LOC107690203,LOC107747465,LOC107582503,LOC107678567 non-coding upstream 806661 8958739 ~ 8960425 (+)
G139998 NA non-coding upstream 834117 8932750 ~ 8932969 (+)
G139997 NA non-coding upstream 846356 8920468 ~ 8920730 (+)
G140190 NA non-coding downstream 8869 9781934 ~ 9785792 (+)
G140192 NA non-coding downstream 14682 9787747 ~ 9788069 (+)
G140223 NA non-coding downstream 165791 9938856 ~ 9960116 (+)
G140250 NA non-coding downstream 206167 9979232 ~ 9979445 (+)
G140260 NA non-coding downstream 229767 10002832 ~ 10003519 (+)
G140030 NA other upstream 436622 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 450453 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 522987 9236740 ~ 9244099 (+)
AMCG00002982 NA other upstream 1270121 8493005 ~ 8496965 (+)
AMCG00002965 eif4ebp2,LOC107564345,LOC107668794,LOC107716353 other upstream 1722673 8037577 ~ 8044413 (+)
G140189 NA other downstream 5185 9778250 ~ 9780452 (+)
AMCG00003019 NA other downstream 71711 9844776 ~ 9853453 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 907706 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 981836 10754901 ~ 10756840 (+)
G140613 NA other downstream 1436508 11209573 ~ 11212111 (+)

Expression


Co-expression Network