G140250


Basic Information

Item Value
gene id G140250
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 9979232 ~ 9979445 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176389
GCATTAAAATTCCTGCAGAACTTAAATTACCCAGAACACCTTTCACAAACAAGATGTCTTCATAAGGAACATTCCCGACTGTCAAACTTGGCGATGTAGGCATTATGGTCTGGAGTTGAATGGCAAGGATGTGGACACTGTTTCTTTGCATGGGTCTTATTATGGAAAGGCCTGCATTTATCGTTTCCTAATAGCACATAATGTGAAGTTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176389 True 214 lncRNA 0.40 1 9979232 9979445

Neighbor

gene id symbol gene type direction distance location
AMCG00003026 NA coding upstream 2570 9965956 ~ 9976662 (+)
AMCG00003024 drgx,LOC107548637,LOC107673892,LOC107588616,LOC107708289,LOC107668808 coding upstream 41851 9929439 ~ 9937381 (+)
AMCG00003023 LOC107552681 coding upstream 53208 9923681 ~ 9926024 (+)
AMCG00003020 NA coding upstream 58688 9901267 ~ 9920544 (+)
AMCG00003018 NA coding upstream 236393 9742438 ~ 9742839 (+)
AMCG00003025 NA coding downstream 17121 9996566 ~ 9997258 (+)
AMCG00003032 NA coding downstream 54479 10033924 ~ 10038457 (+)
AMCG00003033 arhgap22,LOC108443345,LOC103382122 coding downstream 67292 10046737 ~ 10048774 (+)
AMCG00003031 NA coding downstream 88676 10068121 ~ 10077255 (+)
AMCG00003034 NA coding downstream 119014 10098459 ~ 10128943 (+)
G140223 NA non-coding upstream 19116 9938856 ~ 9960116 (+)
G140192 NA non-coding upstream 191163 9787747 ~ 9788069 (+)
G140190 NA non-coding upstream 193440 9781934 ~ 9785792 (+)
G140188 NA non-coding upstream 206167 9767086 ~ 9773065 (+)
G140156 NA non-coding upstream 248369 9730648 ~ 9730863 (+)
G140260 NA non-coding downstream 23387 10002832 ~ 10003519 (+)
G140263 NA non-coding downstream 38533 10017978 ~ 10018198 (+)
G140264 NA non-coding downstream 39160 10018605 ~ 10018823 (+)
G140265 NA non-coding downstream 39970 10019415 ~ 10019619 (+)
G140266 NA non-coding downstream 41379 10020824 ~ 10021457 (+)
AMCG00003019 NA other upstream 125779 9844776 ~ 9853453 (+)
G140189 NA other upstream 198780 9778250 ~ 9780452 (+)
G140030 NA other upstream 648768 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 662599 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 735133 9236740 ~ 9244099 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 701326 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 775456 10754901 ~ 10756840 (+)
G140613 NA other downstream 1230128 11209573 ~ 11212111 (+)
G140693 NA other downstream 1506746 11486191 ~ 11487884 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other downstream 2392554 12371999 ~ 12678159 (+)

Expression


Co-expression Network