G140263


Basic Information

Item Value
gene id G140263
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10017978 ~ 10018198 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176403
TGCCTGTgaagttacaaaacaaaaccaacataaCACCTATCAATCATGGATTACCTTGCCTGTCCCCATTAACTTTCCATTCAGATATGCAGAgactttacatgtttttttcaggtCCTTGGAAATGAGCACTGCCAAGTGATGCCACTGTCCTGGAATGAGGTGTTTGGAGCACTGGAAGCGAACGGAGCTGGGCAGAGCGCTGGTGACTTCGGGCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176403 True 221 lncRNA 0.47 1 10017978 10018198

Neighbor

gene id symbol gene type direction distance location
AMCG00003025 NA coding upstream 20720 9996566 ~ 9997258 (+)
AMCG00003026 NA coding upstream 41316 9965956 ~ 9976662 (+)
AMCG00003024 drgx,LOC107548637,LOC107673892,LOC107588616,LOC107708289,LOC107668808 coding upstream 80597 9929439 ~ 9937381 (+)
AMCG00003023 LOC107552681 coding upstream 91954 9923681 ~ 9926024 (+)
AMCG00003020 NA coding upstream 97434 9901267 ~ 9920544 (+)
AMCG00003032 NA coding downstream 15726 10033924 ~ 10038457 (+)
AMCG00003033 arhgap22,LOC108443345,LOC103382122 coding downstream 28539 10046737 ~ 10048774 (+)
AMCG00003031 NA coding downstream 49923 10068121 ~ 10077255 (+)
AMCG00003034 NA coding downstream 80261 10098459 ~ 10128943 (+)
AMCG00003035 NA coding downstream 145885 10164083 ~ 10166896 (+)
G140260 NA non-coding upstream 14459 10002832 ~ 10003519 (+)
G140250 NA non-coding upstream 38533 9979232 ~ 9979445 (+)
G140223 NA non-coding upstream 57862 9938856 ~ 9960116 (+)
G140192 NA non-coding upstream 229909 9787747 ~ 9788069 (+)
G140190 NA non-coding upstream 232186 9781934 ~ 9785792 (+)
G140264 NA non-coding downstream 407 10018605 ~ 10018823 (+)
G140265 NA non-coding downstream 1217 10019415 ~ 10019619 (+)
G140266 NA non-coding downstream 2626 10020824 ~ 10021457 (+)
G140268 NA non-coding downstream 6741 10024939 ~ 10025149 (+)
G140269 NA non-coding downstream 12028 10030226 ~ 10030523 (+)
AMCG00003019 NA other upstream 164525 9844776 ~ 9853453 (+)
G140189 NA other upstream 237526 9778250 ~ 9780452 (+)
G140030 NA other upstream 687514 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 701345 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 773879 9236740 ~ 9244099 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 662573 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 736703 10754901 ~ 10756840 (+)
G140613 NA other downstream 1191375 11209573 ~ 11212111 (+)
G140693 NA other downstream 1467993 11486191 ~ 11487884 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other downstream 2353801 12371999 ~ 12678159 (+)

Expression


Co-expression Network