G140268


Basic Information

Item Value
gene id G140268
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10024939 ~ 10025149 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176408
CCGGACATAATTGCCTTGCATTAGACTAGTGTTTCTGATCACCATGTTAAAACCTAAATCTCAGGTCTTCTCTGGCTTAATTCAGCTGCATACCTGAGCTAATAGGTGGATCAAACTTGAAGTCTGGAGGCTGAGGATTGCTAACACAAACAGCAACTTTTAATTCGGCTTTCCCACAAATTGTTAGAGCGGCTATGAAATCCATCAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176408 True 211 lncRNA 0.42 1 10024939 10025149

Neighbor

gene id symbol gene type direction distance location
AMCG00003025 NA coding upstream 27681 9996566 ~ 9997258 (+)
AMCG00003026 NA coding upstream 48277 9965956 ~ 9976662 (+)
AMCG00003024 drgx,LOC107548637,LOC107673892,LOC107588616,LOC107708289,LOC107668808 coding upstream 87558 9929439 ~ 9937381 (+)
AMCG00003023 LOC107552681 coding upstream 98915 9923681 ~ 9926024 (+)
AMCG00003020 NA coding upstream 104395 9901267 ~ 9920544 (+)
AMCG00003032 NA coding downstream 8775 10033924 ~ 10038457 (+)
AMCG00003033 arhgap22,LOC108443345,LOC103382122 coding downstream 21588 10046737 ~ 10048774 (+)
AMCG00003031 NA coding downstream 42972 10068121 ~ 10077255 (+)
AMCG00003034 NA coding downstream 73310 10098459 ~ 10128943 (+)
AMCG00003035 NA coding downstream 138934 10164083 ~ 10166896 (+)
G140266 NA non-coding upstream 3482 10020824 ~ 10021457 (+)
G140265 NA non-coding upstream 5320 10019415 ~ 10019619 (+)
G140264 NA non-coding upstream 6116 10018605 ~ 10018823 (+)
G140263 NA non-coding upstream 6741 10017978 ~ 10018198 (+)
G140260 NA non-coding upstream 21420 10002832 ~ 10003519 (+)
G140269 NA non-coding downstream 5077 10030226 ~ 10030523 (+)
G140331 NA non-coding downstream 209686 10234835 ~ 10237083 (+)
G140340 ubtd1b,LOC106578996 non-coding downstream 222686 10247835 ~ 10251525 (+)
G140351 NA non-coding downstream 263288 10288437 ~ 10289935 (+)
G140434 NA non-coding downstream 599614 10624763 ~ 10627882 (+)
AMCG00003019 NA other upstream 171486 9844776 ~ 9853453 (+)
G140189 NA other upstream 244487 9778250 ~ 9780452 (+)
G140030 NA other upstream 694475 9325488 ~ 9330464 (+)
AMCG00002998 NA other upstream 708306 9300311 ~ 9316633 (+)
AMCG00002996 NA other upstream 780840 9236740 ~ 9244099 (+)
AMCG00003066 LOC105931228,LOC105012084,LOC107588449,LOC107706116,LOC108435714,LOC103374338,LOC103154480 other downstream 655622 10680771 ~ 10683612 (+)
G140478 nkx23,LOC106591187,LOC101065636,LOC101073339,LOC101063040,LOC104962797 other downstream 729752 10754901 ~ 10756840 (+)
G140613 NA other downstream 1184424 11209573 ~ 11212111 (+)
G140693 NA other downstream 1461042 11486191 ~ 11487884 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other downstream 2346850 12371999 ~ 12678159 (+)

Expression


Co-expression Network