G140456


Basic Information

Item Value
gene id G140456
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 10622606 ~ 10623742 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176655
TGTTagaaagacataaaaataagaggttttatttctgtgcaccaagttaaaatacaatagaccagtataaaacacaacaacttCCTTTTAACATTAGCCAGCAAAGGCATAGTGGTAACAGAGGAtgcacatgtatttaatgtacgTGTTCTCAAGTAAGCTatacaaaaatagtttaaagCAGTTTGTGTAGCAGAGGGGAAGGGTGTACGTTTTCTTAATTAACTATGTTACCACTTAATCCAAGAATGCCCCAAATTTGACTGATTTAATTGATCCACTTCACTTCACTTACAGCTAAATAACTGTACAGCTACAACTAAAACAATGAAACTTTGGCTTGCATACCTtatgcaggaaaaaataaaattccaaatacaaacctgaattaaaaatacaagtgTCAGTTTTGGTGGAGAATTAAAGAATCTGAATCCAGAAATGCCATAATGCCCTGAGTAGATAACAGCCCTGGTTTATCTAGGTCACTCTTTACAGCTCAGGGATTGTCTCTGATTTTTCTTACAGAGAGGAAATAGAAACAACTGATTTCAACATCTTGATAGTGGCTGTTTGGAAAGATTCCCAAATATTCCCAATCACTGTATAGAATGGGAATCTGCTGAAGGAAAGACTACCTTTTAAACACGTTCTAACACCCAATAACTGCCGAGCTTCTACAAACTTTAAACTGCATGGCTCCTTTTGGGTCCCAGGGGCAAATAACCTCTAACTGAAAATGAACCCTCTCAACTCAGAACATCAACAATTTGGTGTCTTTTGCCCCTAGTTTCTCATGGCTCTAAAAAAGGTTACTGATTCTCACTTGGATTATTCACAGAAGGACGTCtcaaaaacaattgtttttctGAGATGGCTGCTGCCCACAGACCTTTCCAAACACAGGAAACCGAAATTCTGCAGATCTTGGTGCACCACACATGTCACTGATGGCTGTGAAATGTTCTTATCCACTCCGAGGGGGTCATGATGGGCTGCTCATTTTCCCTCCCAAGCATCATCACGTTGTTTAGCTGCCAAGCGCTTTTGGTCTAatggagaaaaacacatttacagattatttaaatgttgaagTTATTTTTAAGCAGGACTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176655 True 1117 lncRNA 0.38 2 10622606 10623742

Neighbor

gene id symbol gene type direction distance location
AMCG00003060 crtac1,LOC107832886,LOC106964415 coding downstream 21955 10581393 ~ 10600651 (-)
AMCG00003063 NA coding downstream 44503 10574632 ~ 10578103 (-)
AMCG00003055 NA coding downstream 52068 10563253 ~ 10570538 (-)
AMCG00003054 sfrp5,LOC107747303,LOC107564685,LOC107665568,LOC107728441,LOC107601040 coding downstream 103122 10517867 ~ 10519484 (-)
AMCG00003056 LOC107702728,LOC107665568,LOC107747303,LOC107564685,LOC107728441,LOC107601040 coding downstream 111177 10498202 ~ 10511429 (-)
AMCG00003059 NA coding upstream 1218 10624960 ~ 10647910 (-)
AMCG00003062 NA coding upstream 33319 10657061 ~ 10662103 (-)
AMCG00003061 NA coding upstream 46763 10670505 ~ 10679832 (-)
AMCG00003067 NA coding upstream 70850 10694592 ~ 10700613 (-)
AMCG00003068 NA coding upstream 107200 10730942 ~ 10743690 (-)
G140368 NA non-coding downstream 283346 10221780 ~ 10339260 (-)
G140279 NA non-coding downstream 584749 10036178 ~ 10037857 (-)
G140228 NA non-coding downstream 732980 9889158 ~ 9889626 (-)
G140217 NA non-coding downstream 769193 9848895 ~ 9853413 (-)
G140199 NA non-coding downstream 851099 9765653 ~ 9771507 (-)
G140458 NA non-coding upstream 29583 10653325 ~ 10656997 (-)
G140521 NA non-coding upstream 195027 10818769 ~ 10819159 (-)
G140537 NA non-coding upstream 302376 10926118 ~ 10929972 (-)
G140546 NA non-coding upstream 341790 10965532 ~ 10967602 (-)
G140567 NA non-coding upstream 387396 11011138 ~ 11037311 (-)
AMCG00003049 NA other downstream 291234 10301800 ~ 10331372 (-)
AMCG00003017 NA other downstream 1015290 9596943 ~ 9607316 (-)
G140015 NA other downstream 1384876 9236658 ~ 9237730 (-)
G140006 NA other downstream 1774766 8847032 ~ 8847840 (-)
G139933 LOC108443181 other downstream 2128010 8485361 ~ 8494596 (-)
AMCG00003110 LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 other upstream 984721 11608463 ~ 11622649 (-)
G140758 NA other upstream 1017074 11640816 ~ 11647619 (-)
G140757 NA other upstream 1070264 11694006 ~ 11733762 (-)
AMCG00003138 NA other upstream 2104496 12728238 ~ 12739807 (-)
AMCG00003144 NA other upstream 2227279 12851021 ~ 12855341 (-)

Expression


Co-expression Network