Gene
RNA
| Item | Value |
|---|---|
| gene id | G140588 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 11107396 ~ 11107604 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU176821 | True | 209 | lncRNA | 0.45 | 1 | 11107396 | 11107604 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003089 | tacr2,LOC107666460 | coding | downstream | 59634 | 11040337 ~ 11047762 (-) |
| AMCG00003079 | NA | coding | downstream | 150995 | 10954588 ~ 10956401 (-) |
| AMCG00003081 | NA | coding | downstream | 155959 | 10945019 ~ 10951437 (-) |
| AMCG00003078 | NA | coding | downstream | 183818 | 10919149 ~ 10923578 (-) |
| AMCG00003080 | NA | coding | downstream | 194815 | 10907992 ~ 10912581 (-) |
| AMCG00003106 | hnrnph3,LOC108438202 | coding | upstream | 30593 | 11138197 ~ 11166902 (-) |
| AMCG00003097 | NA | coding | upstream | 62936 | 11170540 ~ 11175031 (-) |
| AMCG00003104 | ccar1,LOC107708455,LOC107747452,LOC107582549 | coding | upstream | 99869 | 11207473 ~ 11224433 (-) |
| AMCG00003099 | LOC107089835 | coding | upstream | 117631 | 11225235 ~ 11230377 (-) |
| AMCG00003098 | if4e,eif4e1c,LOC108444323,LOC107690176,LOC107582514,LOC103032634 | coding | upstream | 133167 | 11240771 ~ 11251621 (-) |
| G140567 | NA | non-coding | downstream | 70085 | 11011138 ~ 11037311 (-) |
| G140546 | NA | non-coding | downstream | 139794 | 10965532 ~ 10967602 (-) |
| G140537 | NA | non-coding | downstream | 177424 | 10926118 ~ 10929972 (-) |
| G140521 | NA | non-coding | downstream | 288237 | 10818769 ~ 10819159 (-) |
| G140458 | NA | non-coding | downstream | 450399 | 10653325 ~ 10656997 (-) |
| G140648 | NA | non-coding | upstream | 126064 | 11233668 ~ 11308389 (-) |
| G140704 | NA | non-coding | upstream | 224825 | 11332429 ~ 11333684 (-) |
| G140742 | NA | non-coding | upstream | 490454 | 11598058 ~ 11599956 (-) |
| G140756 | NA | non-coding | upstream | 517821 | 11625425 ~ 11626381 (-) |
| G140764 | NA | non-coding | upstream | 678810 | 11786414 ~ 11789926 (-) |
| AMCG00003049 | NA | other | downstream | 776024 | 10301800 ~ 10331372 (-) |
| AMCG00003017 | NA | other | downstream | 1500080 | 9596943 ~ 9607316 (-) |
| G140015 | NA | other | downstream | 1869666 | 9236658 ~ 9237730 (-) |
| G140006 | NA | other | downstream | 2259556 | 8847032 ~ 8847840 (-) |
| G139933 | LOC108443181 | other | downstream | 2612800 | 8485361 ~ 8494596 (-) |
| AMCG00003110 | LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 | other | upstream | 500859 | 11608463 ~ 11622649 (-) |
| G140758 | NA | other | upstream | 533212 | 11640816 ~ 11647619 (-) |
| G140757 | NA | other | upstream | 586402 | 11694006 ~ 11733762 (-) |
| AMCG00003138 | NA | other | upstream | 1620634 | 12728238 ~ 12739807 (-) |
| AMCG00003144 | NA | other | upstream | 1743417 | 12851021 ~ 12855341 (-) |
