G140704


Basic Information

Item Value
gene id G140704
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 11332429 ~ 11333684 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU176996
TTTCTCTGGCATAAAGTTtagctttatttttagaaaccaCTGCAGGCTCTTACATTAATCTCTCAGCAACACGAACAATAGAAACATTGAGTTGAACAAGCAGGAACTTTGATGAGTCTTCAATGTCCTGTAACATTTCATTCTGTTATATTAAGCATCACACCACCATATAGGCTTCCAATGATAATTAACAGTTGTGGTATTACTACCATAATGCATTCAACATGAAGGATTCTTCCAGGATTACCATTTATTGTACTGCAATAGAGAATGTTACAGCTTGTGGATCTAGTGAATTCTCAGGGTGTTTagacaaagaaatacaaaaagtgaaaatgacatGCCAGTAACCATGTGTGACAACTAAAGCAAATACtatgattattagtattaagCAATATGTAAGTAAATTAGTAAAGTAAACAGGAAATTATGCATCTACTGAAGCAGCACAGCACAAGTAGCTAGATAATGATGAAAGCTATAAATACTGAACAAAAGCTTGCTTTACTTCGGCTCTAGTAAACTGCACACTCGGGCTAAATGTGTTCCATTGCGGTTATGCTGGTtcgtattttaaaatgtatttattattcacaatatACCATTTTGATAATTTTTTGTTAGATAAGTTCAATTTGAAAGTAGCTGAGTGCATGTAGAAACAGAGGGTTCTTAATCTTCCCTTATATGTAAATAgaaactgtaactgtaattgGTTTGAACAGCAGGAATATTAaggaataaaaatgtacaatgtggtttttattttaaactgaagcTTCAGTGAATGCTTCCtgatttttgatttaaaaaataataaattttaaatgtaagcatttttaaatacgaGTTGAGCTTGATTGTCTTGATTGCAAATATACAGGCCTACAAAATACAAGGAATTTCACAACCACAAAGcataaaaacatagaaaatgcTATTAATTCCAGTGAACAGCAGTAAATTAAGCAAGGTTGGAtgtccataaaaaaataaaataataaggagATAAAAGggttaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatgtttggtATTTAAAATACTACGTTTTAGACTCTGggcttaaataataatattttttttttaatcatatagCATAGTGGATGCAAATTCTTCAAAATGTAGATTTAGTTTTAGGACATACATTGGATTTCTGATTTGGTTATTGACCTTCCATATCAGCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176996 True 1231 lncRNA 0.31 2 11332429 11333684

Neighbor

gene id symbol gene type direction distance location
AMCG00003100 NA coding downstream 59755 11253483 ~ 11272674 (-)
AMCG00003098 if4e,eif4e1c,LOC108444323,LOC107690176,LOC107582514,LOC103032634 coding downstream 80808 11240771 ~ 11251621 (-)
AMCG00003099 LOC107089835 coding downstream 102052 11225235 ~ 11230377 (-)
AMCG00003104 ccar1,LOC107708455,LOC107747452,LOC107582549 coding downstream 107996 11207473 ~ 11224433 (-)
AMCG00003097 NA coding downstream 157398 11170540 ~ 11175031 (-)
AMCG00003102 march8 coding upstream 26743 11360427 ~ 11374048 (-)
AMCG00003101 NA coding upstream 105681 11439365 ~ 11455653 (-)
AMCG00003103 fam21c coding upstream 122556 11456240 ~ 11478384 (-)
AMCG00003105 hells coding upstream 218007 11551691 ~ 11562305 (-)
AMCG00003114 gbf1 coding upstream 465971 11799655 ~ 11802872 (-)
G140648 NA non-coding downstream 24040 11233668 ~ 11308389 (-)
G140588 NA non-coding downstream 224825 11107396 ~ 11107604 (-)
G140567 NA non-coding downstream 295118 11011138 ~ 11037311 (-)
G140546 NA non-coding downstream 364827 10965532 ~ 10967602 (-)
G140537 NA non-coding downstream 402457 10926118 ~ 10929972 (-)
G140742 NA non-coding upstream 264374 11598058 ~ 11599956 (-)
G140756 NA non-coding upstream 291741 11625425 ~ 11626381 (-)
G140764 NA non-coding upstream 452730 11786414 ~ 11789926 (-)
G140763 LOC106513751,LOC103376442,LOC107375490 non-coding upstream 462292 11795976 ~ 11797014 (-)
G140883 NA non-coding upstream 1023762 12357446 ~ 12362204 (-)
AMCG00003049 NA other downstream 1001057 10301800 ~ 10331372 (-)
AMCG00003017 NA other downstream 1725113 9596943 ~ 9607316 (-)
G140015 NA other downstream 2094699 9236658 ~ 9237730 (-)
G140006 NA other downstream 2484589 8847032 ~ 8847840 (-)
G139933 LOC108443181 other downstream 2837833 8485361 ~ 8494596 (-)
AMCG00003110 LOC107699307,LOC108442385,LOC108263686,LOC107727357,LOC105890865,LOC104955882 other upstream 274779 11608463 ~ 11622649 (-)
G140758 NA other upstream 307132 11640816 ~ 11647619 (-)
G140757 NA other upstream 360322 11694006 ~ 11733762 (-)
AMCG00003138 NA other upstream 1394554 12728238 ~ 12739807 (-)
AMCG00003144 NA other upstream 1517337 12851021 ~ 12855341 (-)

Expression


Co-expression Network