G141156


Basic Information

Item Value
gene id G141156
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 13560598 ~ 13560839 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU177565
tgactgagacgcgcactttagttcaattaaagctgctatattgtatccGGATGATTCATGTGAAACGTGTGGATTTTGtctcaactgtaacttgcccgggttgaggacgtctgataagtacattattaataatacggCAAAGAGTAtggtttgcagttacaaatctgtagtaaggaATAAATGAAGgcagtcacgctgtgccgtttaaaatacatatatagcagcacaaatgatgacgataa

Function

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU177565 True 242 lncRNA 0.38 1 13560598 13560839

Neighbor

gene id symbol gene type direction distance location
AMCG00003166 NA coding upstream 3351 13519114 ~ 13557247 (+)
AMCG00003167 NA coding upstream 47349 13489808 ~ 13513249 (+)
AMCG00003163 NA coding upstream 93354 13456935 ~ 13467244 (+)
AMCG00003162 NA coding upstream 106221 13433314 ~ 13454377 (+)
AMCG00003160 ndst2,LOC106606834,LOC107726987,LOC107666426,LOC107743572 coding upstream 291431 13224328 ~ 13269167 (+)
AMCG00003169 opn4a coding downstream 72589 13633428 ~ 13649760 (+)
AMCG00003170 ldb3b,ldb3,LOC107552745,LOC107749342,LOC108274368 coding downstream 143991 13704830 ~ 13721559 (+)
AMCG00003171 bmpr1a coding downstream 219317 13780156 ~ 13793709 (+)
AMCG00003172 LOC106904390,LOC104951044,LOC103481534,LOC107092473,LOC108248219 coding downstream 263051 13823890 ~ 13835041 (+)
AMCG00003175 NA coding downstream 329091 13889930 ~ 13895822 (+)
G141066 NA non-coding upstream 448662 13111737 ~ 13111936 (+)
G140961 NA non-coding upstream 729492 12821875 ~ 12831106 (+)
G140872 NA non-coding upstream 1274322 12286047 ~ 12286276 (+)
G140857 NA non-coding upstream 1401847 12154813 ~ 12158751 (+)
G140738 NA non-coding upstream 1927073 11631963 ~ 11633525 (+)
G141220 NA non-coding downstream 282340 13843179 ~ 13843515 (+)
G141222 NA non-coding downstream 283907 13844746 ~ 13844952 (+)
G141224 NA non-coding downstream 285111 13845950 ~ 13846154 (+)
G141226 NA non-coding downstream 286491 13847330 ~ 13849411 (+)
G141238 NA non-coding downstream 340936 13901775 ~ 13907086 (+)
AMCG00003158 NA other upstream 449964 13106456 ~ 13110634 (+)
AMCG00003141 LOC105923605 other upstream 677600 12878685 ~ 12882998 (+)
G140939 NA other upstream 820831 12730731 ~ 12739767 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other upstream 882439 12371999 ~ 12678159 (+)
G140693 NA other upstream 2072714 11486191 ~ 11487884 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other downstream 164071 13724910 ~ 13743543 (+)
AMCG00003182 NA other downstream 561944 14122783 ~ 14131275 (+)
G141331 NA other downstream 619941 14180780 ~ 14184643 (+)
AMCG00003195 NA other downstream 723011 14283850 ~ 14299993 (+)
AMCG00003207 NA other downstream 1040478 14601317 ~ 14605548 (+)

Expression


Co-expression Network