G141201


Basic Information

Item Value
gene id G141201
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 13765956 ~ 13836294 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU177625
TttggatttaaacaaaaagtaTCTTTATTTCACTGTACTGTTTTATAAAATCAACTCGGtctgtattgtaatatttgatGCCAACTTACAGACGTATACGtttgtgcatgagtgtgtgagtgtctgcatgtgtgtttgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtatctGAGTGCTGTTAAGGCAACATGCAGTCTTTAGTTCCCAATAGCTTCAAAGAAATaacactgtatttgtttttatttttattttttaatacctgTTTCTAGTGACCTAAAGCAGACAATGAGGCTTTTTTAGGTTTGGGCAACAGTGCTAACAGATGTGAgcaaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgcgtgtgcgtgtatgtgtgaaGATGGGAGGAATCGGACATGGAGAGGGGGTGAGGATGGAAGTATAGCCACAGTCCCATCACTCGGTGGCTAAAAATGGGATTCTCTTGAACTGCAGacatttaacatttctaatttctaAAGTCatgatttggtttaatttttgcCCTTGAAACCTTAAAGGCAgtataataaacattattattattattattatcatcatcatcatcatcaaaacctCCTTTATTTAGCACATCCATTTTGTAGGAGAACTCAAAAACATCCTTCTCTCCCCTGTCCAATAGGAAGAGTAGAGACTGCCAGCTTAGAACAGCACATCTCTGAAGTCTAACCATTTGAACAAACTAGAGTTTAAAAAGTGCCAATTTTCCTTATTTTGCCAATGGCTTAGTCACAGTATAAGGTGAAGTCTGATAGGCTTCGGTAGATAGAGTGTGGTCTTGTTTTAACCTCTTGCCAGTGAGACGCAAACTCTCACACAAACCAAAACTCAAATATAGTGCCACCATTAGGTCACTAGTCTATGTAGTCCCATAGTTCTCCATTGTTCACAAAATAACTGGCCCCCTCTAGCCTGGGCTGTATGGAGAATTGGGAAGGACCCTGTTAATGGAGCCTGCTTCCTAACCACAGCTAAGGGACTGTGTGAGGCTAGGAGGGGAGGACAGTGATATAAACCAAGGATGGAAGCTGGTagggtatgtgtgtgtttgtgattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgtgtgtg

Function

GO: NA

KEGG:

id description
ko05014 Amyotrophic lateral sclerosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU177625 True 1160 lncRNA 0.40 2 13765956 13836294

Neighbor

gene id symbol gene type direction distance location
AMCG00003165 NA coding downstream 360759 13396383 ~ 13405197 (-)
AMCG00003161 LOC108273829,LOC107561852 coding downstream 424191 13288224 ~ 13341765 (-)
AMCG00003159 NA coding downstream 660559 13047336 ~ 13105397 (-)
AMCG00003153 NA coding downstream 752986 13012461 ~ 13012970 (-)
AMCG00003152 NA coding downstream 779184 12986350 ~ 12986772 (-)
AMCG00003174 gdh01,gdh3.2,glud1 coding upstream 12216 13848510 ~ 13871340 (-)
AMCG00003177 LOC106589263,LOC106579284 coding upstream 106020 13942314 ~ 13951931 (-)
AMCG00003180 NA coding upstream 128587 13964881 ~ 13994367 (-)
AMCG00003181 NA coding upstream 218607 14054901 ~ 14061129 (-)
AMCG00003187 LOC106577245,LOC105010620,LOC103366016,LOC107678534,LOC104937335 coding upstream 260496 14096790 ~ 14108291 (-)
G141175 NA non-coding downstream 205117 13560519 ~ 13560839 (-)
G140971 NA non-coding downstream 935030 12821902 ~ 12830926 (-)
G140906 NA non-coding downstream 1160004 12605752 ~ 12605952 (-)
G140904 NA non-coding downstream 1162925 12602822 ~ 12603031 (-)
G140883 NA non-coding downstream 1403752 12357446 ~ 12362204 (-)
G141221 NA non-coding upstream 6885 13843179 ~ 13843471 (-)
G141225 NA non-coding upstream 9656 13845950 ~ 13846159 (-)
G141260 NA non-coding upstream 98990 13935284 ~ 13937709 (-)
G141261 NA non-coding upstream 135473 13971767 ~ 13971966 (-)
G141304 NA non-coding upstream 226878 14063172 ~ 14063526 (-)
AMCG00003164 sec24c other downstream 335632 13407272 ~ 13430324 (-)
G141004 NA other downstream 886535 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 910615 12851021 ~ 12855341 (-)
AMCG00003138 NA other downstream 1026149 12728238 ~ 12739807 (-)
G140757 NA other downstream 2032194 11694006 ~ 11733762 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other upstream 833121 14669415 ~ 14674420 (-)
AMCG00003231 NA other upstream 1220349 15056643 ~ 15140819 (-)
G141826 NA other upstream 2911767 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 5707343 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 5965785 19802079 ~ 19876762 (-)

Expression


Co-expression Network