Gene
RNA
| Item | Value |
|---|---|
| gene id | G141220 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 13843179 ~ 13843515 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU177650 | True | 337 | lncRNA | 0.50 | 1 | 13843179 | 13843515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003172 | LOC106904390,LOC104951044,LOC103481534,LOC107092473,LOC108248219 | coding | upstream | 8138 | 13823890 ~ 13835041 (+) |
| AMCG00003171 | bmpr1a | coding | upstream | 49470 | 13780156 ~ 13793709 (+) |
| AMCG00003170 | ldb3b,ldb3,LOC107552745,LOC107749342,LOC108274368 | coding | upstream | 121620 | 13704830 ~ 13721559 (+) |
| AMCG00003169 | opn4a | coding | upstream | 193419 | 13633428 ~ 13649760 (+) |
| AMCG00003166 | NA | coding | upstream | 285932 | 13519114 ~ 13557247 (+) |
| AMCG00003175 | NA | coding | downstream | 46415 | 13889930 ~ 13895822 (+) |
| AMCG00003176 | NA | coding | downstream | 71590 | 13915105 ~ 13937723 (+) |
| AMCG00003178 | NA | coding | downstream | 176830 | 14020345 ~ 14028256 (+) |
| AMCG00003179 | NA | coding | downstream | 194997 | 14038512 ~ 14048879 (+) |
| AMCG00003186 | zgc:154058,LOC106579282 | coding | downstream | 226204 | 14069719 ~ 14080330 (+) |
| G141156 | NA | non-coding | upstream | 282340 | 13560598 ~ 13560839 (+) |
| G141066 | NA | non-coding | upstream | 731243 | 13111737 ~ 13111936 (+) |
| G140961 | NA | non-coding | upstream | 1012073 | 12821875 ~ 12831106 (+) |
| G140872 | NA | non-coding | upstream | 1556903 | 12286047 ~ 12286276 (+) |
| G140857 | NA | non-coding | upstream | 1684428 | 12154813 ~ 12158751 (+) |
| G141222 | NA | non-coding | downstream | 1231 | 13844746 ~ 13844952 (+) |
| G141224 | NA | non-coding | downstream | 2435 | 13845950 ~ 13846154 (+) |
| G141226 | NA | non-coding | downstream | 3815 | 13847330 ~ 13849411 (+) |
| G141238 | NA | non-coding | downstream | 58260 | 13901775 ~ 13907086 (+) |
| G141245 | NA | non-coding | downstream | 106407 | 13949922 ~ 13950128 (+) |
| AMCG00003168 | LOC107706030,LOC107743565,LOC107666486 | other | upstream | 99636 | 13724910 ~ 13743543 (+) |
| AMCG00003158 | NA | other | upstream | 732545 | 13106456 ~ 13110634 (+) |
| AMCG00003141 | LOC105923605 | other | upstream | 960181 | 12878685 ~ 12882998 (+) |
| G140939 | NA | other | upstream | 1103412 | 12730731 ~ 12739767 (+) |
| AMCG00003129 | rab11fip2,LOC107585298,LOC107733785 | other | upstream | 1165020 | 12371999 ~ 12678159 (+) |
| AMCG00003182 | NA | other | downstream | 279268 | 14122783 ~ 14131275 (+) |
| G141331 | NA | other | downstream | 337265 | 14180780 ~ 14184643 (+) |
| AMCG00003195 | NA | other | downstream | 440335 | 14283850 ~ 14299993 (+) |
| AMCG00003207 | NA | other | downstream | 757802 | 14601317 ~ 14605548 (+) |
| AMCG00003257 | ablim1 | other | downstream | 2620779 | 16464294 ~ 16500994 (+) |
