G141222


Basic Information

Item Value
gene id G141222
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 13844746 ~ 13844952 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU177652
ACTGtatcatgtatatttatttatttaaactttatttcaaaacagattACAGGCAATGGTTTTCACTCTCAATCTGCTTATGAATTCAAGTCCAAAGCATGTCCCTGAAGGGCAGATTGGTTAAGTCACCTCAAAGGGCTTAGAAACACTGTGGgattgcagtttgtttgcctGCAGAGTATAGGGAATATGAAAGATCTTCCANNN

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177652 True 207 lncRNA 0.36 1 13844746 13844952

Neighbor

gene id symbol gene type direction distance location
AMCG00003172 LOC106904390,LOC104951044,LOC103481534,LOC107092473,LOC108248219 coding upstream 9705 13823890 ~ 13835041 (+)
AMCG00003171 bmpr1a coding upstream 51037 13780156 ~ 13793709 (+)
AMCG00003170 ldb3b,ldb3,LOC107552745,LOC107749342,LOC108274368 coding upstream 123187 13704830 ~ 13721559 (+)
AMCG00003169 opn4a coding upstream 194986 13633428 ~ 13649760 (+)
AMCG00003166 NA coding upstream 287499 13519114 ~ 13557247 (+)
AMCG00003175 NA coding downstream 44978 13889930 ~ 13895822 (+)
AMCG00003176 NA coding downstream 70153 13915105 ~ 13937723 (+)
AMCG00003178 NA coding downstream 175393 14020345 ~ 14028256 (+)
AMCG00003179 NA coding downstream 193560 14038512 ~ 14048879 (+)
AMCG00003186 zgc:154058,LOC106579282 coding downstream 224767 14069719 ~ 14080330 (+)
G141220 NA non-coding upstream 1231 13843179 ~ 13843515 (+)
G141156 NA non-coding upstream 283907 13560598 ~ 13560839 (+)
G141066 NA non-coding upstream 732810 13111737 ~ 13111936 (+)
G140961 NA non-coding upstream 1013640 12821875 ~ 12831106 (+)
G140872 NA non-coding upstream 1558470 12286047 ~ 12286276 (+)
G141224 NA non-coding downstream 998 13845950 ~ 13846154 (+)
G141226 NA non-coding downstream 2378 13847330 ~ 13849411 (+)
G141238 NA non-coding downstream 56823 13901775 ~ 13907086 (+)
G141245 NA non-coding downstream 104970 13949922 ~ 13950128 (+)
G141248 NA non-coding downstream 135885 13980837 ~ 13981099 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 101203 13724910 ~ 13743543 (+)
AMCG00003158 NA other upstream 734112 13106456 ~ 13110634 (+)
AMCG00003141 LOC105923605 other upstream 961748 12878685 ~ 12882998 (+)
G140939 NA other upstream 1104979 12730731 ~ 12739767 (+)
AMCG00003129 rab11fip2,LOC107585298,LOC107733785 other upstream 1166587 12371999 ~ 12678159 (+)
AMCG00003182 NA other downstream 277831 14122783 ~ 14131275 (+)
G141331 NA other downstream 335828 14180780 ~ 14184643 (+)
AMCG00003195 NA other downstream 438898 14283850 ~ 14299993 (+)
AMCG00003207 NA other downstream 756365 14601317 ~ 14605548 (+)
AMCG00003257 ablim1 other downstream 2619342 16464294 ~ 16500994 (+)

Expression


Co-expression Network