Item | Value |
---|---|
gene id | G141238 |
gene name | NA |
gene type | non-coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030139.1 |
NCBI id | CM030139.1 |
chromosome length | 23121578 |
location | 13901775 ~ 13907086 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU177670 | True | 445 | lncRNA | 0.34 | 2 | 13901775 | 13907086 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00003175 | NA | coding | upstream | 5953 | 13889930 ~ 13895822 (+) |
AMCG00003172 | LOC106904390,LOC104951044,LOC103481534,LOC107092473,LOC108248219 | coding | upstream | 66734 | 13823890 ~ 13835041 (+) |
AMCG00003171 | bmpr1a | coding | upstream | 108066 | 13780156 ~ 13793709 (+) |
AMCG00003170 | ldb3b,ldb3,LOC107552745,LOC107749342,LOC108274368 | coding | upstream | 180216 | 13704830 ~ 13721559 (+) |
AMCG00003169 | opn4a | coding | upstream | 252015 | 13633428 ~ 13649760 (+) |
AMCG00003176 | NA | coding | downstream | 8019 | 13915105 ~ 13937723 (+) |
AMCG00003178 | NA | coding | downstream | 113259 | 14020345 ~ 14028256 (+) |
AMCG00003179 | NA | coding | downstream | 131426 | 14038512 ~ 14048879 (+) |
AMCG00003186 | zgc:154058,LOC106579282 | coding | downstream | 162633 | 14069719 ~ 14080330 (+) |
AMCG00003185 | NA | coding | downstream | 184822 | 14091908 ~ 14093014 (+) |
G141226 | NA | non-coding | upstream | 52364 | 13847330 ~ 13849411 (+) |
G141224 | NA | non-coding | upstream | 55621 | 13845950 ~ 13846154 (+) |
G141222 | NA | non-coding | upstream | 56823 | 13844746 ~ 13844952 (+) |
G141220 | NA | non-coding | upstream | 58260 | 13843179 ~ 13843515 (+) |
G141156 | NA | non-coding | upstream | 340936 | 13560598 ~ 13560839 (+) |
G141245 | NA | non-coding | downstream | 42836 | 13949922 ~ 13950128 (+) |
G141248 | NA | non-coding | downstream | 73751 | 13980837 ~ 13981099 (+) |
G141249 | NA | non-coding | downstream | 74289 | 13981375 ~ 13985426 (+) |
G141282 | NA | non-coding | downstream | 146383 | 14053469 ~ 14053682 (+) |
G141401 | NA | non-coding | downstream | 536771 | 14443857 ~ 14445355 (+) |
AMCG00003168 | LOC107706030,LOC107743565,LOC107666486 | other | upstream | 158232 | 13724910 ~ 13743543 (+) |
AMCG00003158 | NA | other | upstream | 791141 | 13106456 ~ 13110634 (+) |
AMCG00003141 | LOC105923605 | other | upstream | 1018777 | 12878685 ~ 12882998 (+) |
G140939 | NA | other | upstream | 1162008 | 12730731 ~ 12739767 (+) |
AMCG00003129 | rab11fip2,LOC107585298,LOC107733785 | other | upstream | 1223616 | 12371999 ~ 12678159 (+) |
AMCG00003182 | NA | other | downstream | 215697 | 14122783 ~ 14131275 (+) |
G141331 | NA | other | downstream | 273694 | 14180780 ~ 14184643 (+) |
AMCG00003195 | NA | other | downstream | 376764 | 14283850 ~ 14299993 (+) |
AMCG00003207 | NA | other | downstream | 694231 | 14601317 ~ 14605548 (+) |
AMCG00003257 | ablim1 | other | downstream | 2557208 | 16464294 ~ 16500994 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_011247 | si:ch211-236p5.2 | coding | NC_007128.7 | CM002901.2 | 8270864 ~ 8287309 (+) |