G141374


Basic Information

Item Value
gene id G141374
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14377649 ~ 14378313 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU177827
CATGTTTATACAATttggactttatttttttttctggaaacaaaatgtatacagcAGGACATCCCCTTACGTGAAACTGATCTAGCAAAGGAGGCTTTGTCAAGACCCAACCCAGTTATTTGCAATTCCCAATTATGTGTTCCTTGCTACCCTTTCAATTTCCATTTCCACCAAGTGTTAAAGAACCTGCCTATGACTTGTCTAATACAGGAGACATGTAgtaagcacacacacatcctccGAAACATGAACTGTCAGATGACCTGCTTCTCTTCACACTGCCCGTCTGCAGCGCAGACACCATACCTGGAGCAATGGAGGGAGGTCTAAAAGGAGTTCTCTCGGATCACACCGCAGAGATAACAGACTACACAGGTCTGCAGAAGCTTTTCTACAGTCATTTCAGACAAATGGGAGACTCTCAGGTGAAAGGCAGTGTCCCCTTTTCCATGACGTGACTCGAGAGGATAGTCTGCTGTATTTAAGCGTATTCTGTGTTATTTGAACAACATACTATATTCTAGGCTGGGGTTAGGGTTTGAGCATATCAGTTAAAATTCAAAGAGGCtggagaaaatatgttgttctgcaaaagcacattaaaatacattaaacaccaggtgataacacaacacaataatacatgcaggtaCCCCCATTTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177827 True 665 lncRNA 0.42 1 14377649 14378313

Neighbor

gene id symbol gene type direction distance location
AMCG00003192 NA coding downstream 10426 14341770 ~ 14367223 (-)
AMCG00003194 NA coding downstream 72070 14290195 ~ 14305579 (-)
AMCG00003193 NA coding downstream 91304 14283405 ~ 14286345 (-)
AMCG00003190 LOC105908129 coding downstream 107481 14260867 ~ 14270168 (-)
AMCG00003189 NA coding downstream 189422 14180691 ~ 14188227 (-)
AMCG00003196 NA coding upstream 6782 14385095 ~ 14385715 (-)
AMCG00003201 actr1,LOC103036907,LOC105889177,LOC106585571,LOC108425179,LOC107602067,LOC106579867 coding upstream 27148 14405461 ~ 14411926 (-)
AMCG00003200 arl3,LOC102201386,LOC102778022,LOC108263849,LOC106589841 coding upstream 94031 14472344 ~ 14479936 (-)
AMCG00003205 NA coding upstream 112471 14490784 ~ 14496042 (-)
AMCG00003206 mgea5,LOC107666422,LOC107667060,LOC107585241 coding upstream 120980 14499293 ~ 14512805 (-)
G141372 NA non-coding downstream 3480 14373967 ~ 14374169 (-)
G141319 NA non-coding downstream 246583 14124884 ~ 14131066 (-)
G141305 NA non-coding downstream 313478 14063800 ~ 14064171 (-)
G141304 NA non-coding downstream 314123 14063172 ~ 14063526 (-)
G141261 NA non-coding downstream 405683 13971767 ~ 13971966 (-)
G141402 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107722222,LOC107690907 non-coding upstream 65518 14443831 ~ 14446505 (-)
G141517 NA non-coding upstream 252099 14630412 ~ 14669084 (-)
G141520 NA non-coding upstream 281106 14659419 ~ 14659991 (-)
G141569 NA non-coding upstream 775703 15154016 ~ 15154370 (-)
G141571 NA non-coding upstream 785641 15163954 ~ 15172448 (-)
AMCG00003164 sec24c other downstream 947325 13407272 ~ 13430324 (-)
G141004 NA other downstream 1498228 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 1522308 12851021 ~ 12855341 (-)
AMCG00003138 NA other downstream 1637842 12728238 ~ 12739807 (-)
G140757 NA other downstream 2643887 11694006 ~ 11733762 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other upstream 291102 14669415 ~ 14674420 (-)
AMCG00003231 NA other upstream 678330 15056643 ~ 15140819 (-)
G141826 NA other upstream 2369748 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 5165324 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 5423766 19802079 ~ 19876762 (-)

Expression


Co-expression Network