G141401


Basic Information

Item Value
gene id G141401
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 14443857 ~ 14445355 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU177856
TCCCGCAAGCCAGTGCCTGCATTCCTCTCCCCACGAAGACTGCGTGGacgaaacagaaacacaaatcacgaataacaataacacacacacacggactgGACTAACACcggaaaacaaaaccacccaGAGACGCGACCCGCCGCCGTGGATTTTACAAAGAGAGCTGCGTCCCTGGGAAGACACGTACGCGCAGGAGGAGCGGGACCAGCCTGtgtgaagtttatttttatatctttcaAAGCGACCACGACTGGGAGAAAAGAGGCAGGTTTGGGCCCAATCTCCCCCAGCGTCgatttcttttttccctttccccctttttaaagaggaaaacaagATGGCTGATGACAGCGAACGATAACAAGGGCAGAGCGGCGCCGTCCCCTTTAAGAGCGAAAAAGGGTATAAAATAtcgctctctctttttttatataagttGGACAATAAAAGGGGATGCGTGGGAAGAGGGGGCTTTCTTTCCGAGGGCGATTTCCACGGGGGTCTTGAGAGAGCTGGGGGGCAGGCGGGAGAGATGGTAAAGCCTGCTTTCACGTCTCTAAGCGGGGAGAGATAGTAGCCGTTTGTGTGGGAGCTCGGTGAGGTGAGAGCGGATCAGCCGACACGACTGAATATTACAATAATCTCCATTGACCGGATCTCCAAAACCTGCGAGCCTAGCCCTCTCTccgtatataaatatatacacatatgtatattttactgaAACCTTTTAATAGAAacgtgtgtgtttattttattttaatttttttttgttctgcgCGACTGACTTCCTTTTCTAACGCAGGGGAGCTGAAAAGCGATCAACTGAaataggaaatatatataatagatgATCTACTTTCGATCGATATATTgcaaaggtttatttttcaatgaaacactttttataataaattattacagAGGACGTAATAAAGAGAGCGAAACGGCAGAGGCCTTGTGTCCGGATCGTTTTTTGTATGTGAtctgatatttttaatacataatattacaAAGCTGTACTGTAGTAAGTGCTGGCGACAGAGCCTCTATCGGATGCTGCTATATGATAAGCGATATTAAAACAAGGGCTAAAGGTACTTTTGTAAGGTGGGCCGTTTTGTAACCTAAGAAAAAGACCTGCTGGTCGGTGGggtttgtgtgcgtttgtgctGGAGCTGCGAGCAGATTGACGGCGGCTGTATTGGACCTGGCGGCGCATGTTGCGATTTTGTGTCCGTTTTCCTCCCTTCCTCCTCAGCCACAATGACAGCGATCGGTGGTGTCCTGATGAATTCTGGATTATTCTCCACTGTGGTGTGATTTTTTAACAGATCTGAACCCAAACGAGCTTGTGTATCGGGTTTTTCAATCGACATTTGAGGGGCGATCGTTACGCAAACGCACCCCACCTTCCCCACGGGCAGAGCTGGGATTTGATCCCGCAAATCGGACTGTTTATCATCCCCCACTCCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177856 True 1479 lncRNA 0.46 2 14443857 14445355

Neighbor

gene id symbol gene type direction distance location
AMCG00003197 sufu,LOC107666454 coding upstream 6272 14412751 ~ 14437585 (+)
AMCG00003199 NA coding upstream 46953 14392589 ~ 14396904 (+)
AMCG00003191 NA coding upstream 170803 14270399 ~ 14273054 (+)
AMCG00003183 NA coding upstream 266401 14156501 ~ 14177456 (+)
AMCG00003184 NA coding upstream 324487 14114691 ~ 14119370 (+)
AMCG00003202 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107690907,LOC107722222 coding downstream 578 14445933 ~ 14455523 (+)
AMCG00003198 LOC107569416 coding downstream 11386 14456741 ~ 14459478 (+)
AMCG00003203 sfxn2,LOC107755483 coding downstream 36714 14482069 ~ 14491605 (+)
AMCG00003211 LOC108444470,LOC107567630,LOC106591328,LOC107700700,LOC108270891,LOC107702035 coding downstream 111539 14556894 ~ 14563419 (+)
AMCG00003210 NA coding downstream 126373 14571728 ~ 14592565 (+)
G141282 NA non-coding upstream 390175 14053469 ~ 14053682 (+)
G141249 NA non-coding upstream 458431 13981375 ~ 13985426 (+)
G141248 NA non-coding upstream 462758 13980837 ~ 13981099 (+)
G141245 NA non-coding upstream 493729 13949922 ~ 13950128 (+)
G141238 NA non-coding upstream 536771 13901775 ~ 13907086 (+)
G141405 NA non-coding downstream 16812 14462167 ~ 14516510 (+)
G141412 mgea5,LOC106961065,LOC107569412 non-coding downstream 55616 14500971 ~ 14508839 (+)
G141573 NA non-coding downstream 740716 15186071 ~ 15186325 (+)
G141574 NA non-coding downstream 744628 15189983 ~ 15190345 (+)
G141582 NA non-coding downstream 771887 15217242 ~ 15217551 (+)
AMCG00003195 NA other upstream 143864 14283850 ~ 14299993 (+)
G141331 NA other upstream 259214 14180780 ~ 14184643 (+)
AMCG00003182 NA other upstream 312582 14122783 ~ 14131275 (+)
AMCG00003168 LOC107706030,LOC107743565,LOC107666486 other upstream 700314 13724910 ~ 13743543 (+)
AMCG00003158 NA other upstream 1333223 13106456 ~ 13110634 (+)
AMCG00003207 NA other downstream 155962 14601317 ~ 14605548 (+)
AMCG00003257 ablim1 other downstream 2018939 16464294 ~ 16500994 (+)
AMCG00003256 NA other downstream 2081834 16527189 ~ 16559206 (+)
G141962 NA other downstream 3230924 17676279 ~ 17678522 (+)
AMCG00003291 bbip1 other downstream 3275889 17721244 ~ 17725381 (+)

Expression


Co-expression Network