G141569


Basic Information

Item Value
gene id G141569
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 15154016 ~ 15154370 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178079
AAGTAACAGCCTGGAGACACAAAGATGTGGGTCAAACCCAAGGATTTTTGGAGAAACTGGTGAGCTCATCCAGGAATGTCCCAGATATGTTGTAGGCCCGTTGGATATAAACACCGGGCGGCTCAGTCCTGAAGGTCCACAGGGGTGGATTTTCTCCCGCAGCACCTTGGCTTCCCGTCTGTGGAAAAGCTGGCGGCTACACACCTTGCCAAGCATGAGCTGCTGTTTATTGAGCAGCCCCGGTTCCAAAGTGCGCAATTGTTCAGAGCAACTTCCGAGTACAGGTAAGCGGTCACGGGTTTCGTCGCAGTTCACTGGTATGTGTCCACCGGCACGCCCGCCTGAGCAAACCTgg

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178079 True 355 lncRNA 0.54 1 15154016 15154370

Neighbor

gene id symbol gene type direction distance location
AMCG00003227 NA coding downstream 123215 15010021 ~ 15030801 (-)
AMCG00003223 NA coding downstream 180417 14963319 ~ 14973599 (-)
AMCG00003222 inpp5f coding downstream 238680 14888182 ~ 14915336 (-)
AMCG00003219 NA coding downstream 276000 14856090 ~ 14878016 (-)
AMCG00003220 NA coding downstream 304393 14832679 ~ 14849623 (-)
AMCG00003240 timm23a,timm23,LOC108426535,LOC107690962,LOC107684090 coding upstream 63457 15217827 ~ 15227554 (-)
AMCG00003241 NA coding upstream 74165 15228535 ~ 15234790 (-)
AMCG00003239 NA coding upstream 98499 15252869 ~ 15259374 (-)
AMCG00003244 NA coding upstream 150430 15304800 ~ 15315470 (-)
AMCG00003245 NA coding upstream 292616 15446986 ~ 15476398 (-)
G141517 NA non-coding downstream 484932 14630412 ~ 14669084 (-)
G141520 NA non-coding downstream 494025 14659419 ~ 14659991 (-)
G141402 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107722222,LOC107690907 non-coding downstream 707511 14443831 ~ 14446505 (-)
G141374 NA non-coding downstream 775703 14377649 ~ 14378313 (-)
G141372 NA non-coding downstream 779847 14373967 ~ 14374169 (-)
G141571 NA non-coding upstream 9584 15163954 ~ 15172448 (-)
G141583 NA non-coding upstream 63104 15217474 ~ 15217807 (-)
G141681 NA non-coding upstream 834565 15988935 ~ 15992678 (-)
G141704 atrnl1b,atrnl1,LOC107755548,LOC107566689,LOC107702414 non-coding upstream 853693 16008063 ~ 16061038 (-)
G141740 NA non-coding upstream 1340468 16494838 ~ 16498441 (-)
AMCG00003231 NA other downstream 13197 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 479596 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 1723692 13407272 ~ 13430324 (-)
G141004 NA other downstream 2274595 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 2298675 12851021 ~ 12855341 (-)
G141826 NA other upstream 1593691 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 4389267 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 4647709 19802079 ~ 19876762 (-)

Expression


Co-expression Network