G141583


Basic Information

Item Value
gene id G141583
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 15217474 ~ 15217807 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178100
TGCAGACTCATTGAAGGGATATCATGCATGtagttacatatataaatgagaCTTCCCACAATACGTTACCTATTACAGACCTATACTAGTTCCACATtacaacttacatttgtacccatttatacagctgggtattttgcTGGAGAAATCTAAGTAAAGAACCTTCCCGTTATGAGTGCAGCACCCTTACCACTGCTCCACAATGTCTACTACTATAACTTTAAAACAATGCGATGTATACTTTTATAATTGTAAAACCCACTTTACTAGAGCACAGTGCCATATTCTGGGTATAGCCCAGTATCTACCTTTTCACGGTTTAATAAATACTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178100 True 334 lncRNA 0.37 1 15217474 15217807

Neighbor

gene id symbol gene type direction distance location
AMCG00003232 NA coding downstream 54068 15149269 ~ 15163406 (-)
AMCG00003227 NA coding downstream 186673 15010021 ~ 15030801 (-)
AMCG00003223 NA coding downstream 243875 14963319 ~ 14973599 (-)
AMCG00003222 inpp5f coding downstream 302138 14888182 ~ 14915336 (-)
AMCG00003219 NA coding downstream 339458 14856090 ~ 14878016 (-)
AMCG00003240 timm23a,timm23,LOC108426535,LOC107690962,LOC107684090 coding upstream 20 15217827 ~ 15227554 (-)
AMCG00003241 NA coding upstream 10728 15228535 ~ 15234790 (-)
AMCG00003239 NA coding upstream 35062 15252869 ~ 15259374 (-)
AMCG00003244 NA coding upstream 86993 15304800 ~ 15315470 (-)
AMCG00003245 NA coding upstream 229179 15446986 ~ 15476398 (-)
G141571 NA non-coding downstream 45026 15163954 ~ 15172448 (-)
G141569 NA non-coding downstream 63104 15154016 ~ 15154370 (-)
G141517 NA non-coding downstream 548390 14630412 ~ 14669084 (-)
G141520 NA non-coding downstream 557483 14659419 ~ 14659991 (-)
G141402 LOC105911637,LOC108421648,LOC103034952,LOC107581594,LOC107722222,LOC107690907 non-coding downstream 770969 14443831 ~ 14446505 (-)
G141681 NA non-coding upstream 771128 15988935 ~ 15992678 (-)
G141704 atrnl1b,atrnl1,LOC107755548,LOC107566689,LOC107702414 non-coding upstream 790256 16008063 ~ 16061038 (-)
G141740 NA non-coding upstream 1277031 16494838 ~ 16498441 (-)
G141795 NA non-coding upstream 1435884 16653691 ~ 16656167 (-)
G141871 aldh18a1,LOC107684039 non-coding upstream 1697131 16914938 ~ 16919500 (-)
AMCG00003231 NA other downstream 76655 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 543054 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 1787150 13407272 ~ 13430324 (-)
G141004 NA other downstream 2338053 12861426 ~ 12879421 (-)
AMCG00003144 NA other downstream 2362133 12851021 ~ 12855341 (-)
G141826 NA other upstream 1530254 16748061 ~ 16748431 (-)
AMCG00003320 NA other upstream 4325830 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 4584272 19802079 ~ 19876762 (-)

Expression


Co-expression Network