G141965


Basic Information

Item Value
gene id G141965
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 17703172 ~ 17703460 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178590
AGCCCTGTAATCCCAAtgtcttttaaaacaacatGGGAAAGTAACTCAGTCGACGCAGCTTGTCTGGTGTGACATCCATCTGCCGCATATTAGTTAGAACCGCACACAATCCCCACCCTGGGGTGAAGCAAGTTCAGAGGTGAAAGGTCACCACAGAGCTCATCCTTAGGATTTgctgtaaaacagaaaaaaataacaaagcattATTTCTCTGTGGAGTAAATATTAGTACACAAATAGGCAAATAGTTCTAGCGATGCAACAGTTTGAGGTGCCAATGTGCCTTGCT

Function

NR:

description
PREDICTED: signal-regulatory protein beta-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178590 True 289 lncRNA 0.43 1 17703172 17703460

Neighbor

gene id symbol gene type direction distance location
AMCG00003284 NA coding upstream 300422 17377073 ~ 17402750 (+)
AMCG00003282 NA coding upstream 348293 17332334 ~ 17354879 (+)
AMCG00003281 zdhhc6,LOC107684040,LOC107755527 coding upstream 391951 17306500 ~ 17311221 (+)
AMCG00003265 NA coding upstream 762065 16933521 ~ 16941107 (+)
AMCG00003264 aldh18a1,LOC107081732 coding upstream 772317 16914965 ~ 16930855 (+)
AMCG00003295 smndc1 coding downstream 188763 17892223 ~ 17896705 (+)
AMCG00003301 NA coding downstream 337315 18040775 ~ 18059015 (+)
AMCG00003302 xpnpep1,LOC106512107,LOC106589391 coding downstream 357976 18061436 ~ 18073141 (+)
AMCG00003305 NA coding downstream 602586 18306046 ~ 18339835 (+)
AMCG00003306 LOC106586852,LOC105012299,LOC107729347,LOC107746059 coding downstream 736047 18439507 ~ 18493790 (+)
G141955 NA non-coding upstream 185251 17517720 ~ 17517921 (+)
G141885 NA non-coding upstream 667930 17032425 ~ 17035242 (+)
G141829 NA non-coding upstream 901860 16798959 ~ 16801312 (+)
G141592 NA non-coding upstream 2448328 15252840 ~ 15254844 (+)
G141582 NA non-coding upstream 2485621 15217242 ~ 15217551 (+)
G141966 NA non-coding downstream 9200 17712660 ~ 17712864 (+)
G141999 smc3,LOC107685530 non-coding downstream 135251 17838711 ~ 17840604 (+)
G142014 NA non-coding downstream 236401 17939861 ~ 18000435 (+)
G142062 NA non-coding downstream 791464 18494924 ~ 18496277 (+)
G142083 NA non-coding downstream 1053453 18756913 ~ 18757187 (+)
G141962 NA other upstream 24650 17676279 ~ 17678522 (+)
AMCG00003256 NA other upstream 1143966 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 1202178 16464294 ~ 16500994 (+)
AMCG00003207 NA other upstream 3097624 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 3403179 14283850 ~ 14299993 (+)
AMCG00003291 bbip1 other downstream 17784 17721244 ~ 17725381 (+)
G142078 NA other downstream 885114 18588574 ~ 18692204 (+)
G142172 NA other downstream 1832233 19535693 ~ 19537091 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 1915421 19618881 ~ 19633150 (+)
AMCG00003324 NA other downstream 1947716 19651176 ~ 19658477 (+)

Expression


Co-expression Network