G141966


Basic Information

Item Value
gene id G141966
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 17712660 ~ 17712864 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178591
ATCCAATGTACTACTTGAAAATGCCTTGAAGAAATTAATgccataataaattaaacaaaacaagccaaGGCAAAATATTGTGCAATTCAAACGAATCCCAAGGTACggtcataaataacaaatacaagcCAAACTGACCTTATGTACTGATGCATGTCAGATTTCTTAAGGTTATTATTTCTCTCACTCCCTTTGCCCAACACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178591 True 205 lncRNA 0.35 1 17712660 17712864

Neighbor

gene id symbol gene type direction distance location
AMCG00003284 NA coding upstream 309910 17377073 ~ 17402750 (+)
AMCG00003282 NA coding upstream 357781 17332334 ~ 17354879 (+)
AMCG00003281 zdhhc6,LOC107684040,LOC107755527 coding upstream 401439 17306500 ~ 17311221 (+)
AMCG00003265 NA coding upstream 771553 16933521 ~ 16941107 (+)
AMCG00003264 aldh18a1,LOC107081732 coding upstream 781805 16914965 ~ 16930855 (+)
AMCG00003295 smndc1 coding downstream 179359 17892223 ~ 17896705 (+)
AMCG00003301 NA coding downstream 327911 18040775 ~ 18059015 (+)
AMCG00003302 xpnpep1,LOC106512107,LOC106589391 coding downstream 348572 18061436 ~ 18073141 (+)
AMCG00003305 NA coding downstream 593182 18306046 ~ 18339835 (+)
AMCG00003306 LOC106586852,LOC105012299,LOC107729347,LOC107746059 coding downstream 726643 18439507 ~ 18493790 (+)
G141965 NA non-coding upstream 9200 17703172 ~ 17703460 (+)
G141955 NA non-coding upstream 194739 17517720 ~ 17517921 (+)
G141885 NA non-coding upstream 677418 17032425 ~ 17035242 (+)
G141829 NA non-coding upstream 911348 16798959 ~ 16801312 (+)
G141592 NA non-coding upstream 2457816 15252840 ~ 15254844 (+)
G141999 smc3,LOC107685530 non-coding downstream 125847 17838711 ~ 17840604 (+)
G142014 NA non-coding downstream 226997 17939861 ~ 18000435 (+)
G142062 NA non-coding downstream 782060 18494924 ~ 18496277 (+)
G142083 NA non-coding downstream 1044049 18756913 ~ 18757187 (+)
G142085 NA non-coding downstream 1122676 18835540 ~ 18840753 (+)
G141962 NA other upstream 34138 17676279 ~ 17678522 (+)
AMCG00003256 NA other upstream 1153454 16527189 ~ 16559206 (+)
AMCG00003257 ablim1 other upstream 1211666 16464294 ~ 16500994 (+)
AMCG00003207 NA other upstream 3107112 14601317 ~ 14605548 (+)
AMCG00003195 NA other upstream 3412667 14283850 ~ 14299993 (+)
AMCG00003291 bbip1 other downstream 8380 17721244 ~ 17725381 (+)
G142078 NA other downstream 875710 18588574 ~ 18692204 (+)
G142172 NA other downstream 1822829 19535693 ~ 19537091 (+)
AMCG00003323 rnf122,si:dkey-51a16.9,LOC104925894,LOC103353499,LOC106606324 other downstream 1906017 19618881 ~ 19633150 (+)
AMCG00003324 NA other downstream 1938312 19651176 ~ 19658477 (+)

Expression


Co-expression Network