G142060


Basic Information

Item Value
gene id G142060
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 18287003 ~ 18287212 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU178713
aatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagaattattccaggtttgaagggaatgtcctattCGGAGAGATTGAGgaacctgaaccttttcaccctggaacagaggagactatgtggggacttgatccaagtcttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178713 True 210 lncRNA 0.47 1 18287003 18287212

Neighbor

gene id symbol gene type direction distance location
AMCG00003303 NA coding downstream 208016 18075927 ~ 18078987 (-)
AMCG00003304 NA coding downstream 316393 17939871 ~ 17970610 (-)
AMCG00003300 NA coding downstream 360020 17924912 ~ 17926983 (-)
AMCG00003299 LOC104922112,LOC107390704 coding downstream 380595 17903301 ~ 17906408 (-)
AMCG00003296 NA coding downstream 430483 17849780 ~ 17856520 (-)
AMCG00003307 LOC106586800,LOC103372478 coding upstream 555094 18842306 ~ 18888405 (-)
AMCG00003310 NA coding upstream 761464 19048676 ~ 19051173 (-)
AMCG00003309 cfap58 coding upstream 795139 19082351 ~ 19120849 (-)
AMCG00003308 NA coding upstream 833648 19120860 ~ 19129382 (-)
AMCG00003313 NA coding upstream 944599 19231811 ~ 19254717 (-)
G141879 LOC107575789 non-coding downstream 1348957 16937634 ~ 16938046 (-)
G141871 aldh18a1,LOC107684039 non-coding downstream 1367503 16914938 ~ 16919500 (-)
G141795 NA non-coding downstream 1630836 16653691 ~ 16656167 (-)
G141740 NA non-coding downstream 1788562 16494838 ~ 16498441 (-)
G141704 atrnl1b,atrnl1,LOC107755548,LOC107566689,LOC107702414 non-coding downstream 2225965 16008063 ~ 16061038 (-)
G142064 NA non-coding upstream 17419 18304631 ~ 18304978 (-)
G142066 NA non-coding upstream 19150 18306362 ~ 18306683 (-)
G142090 NA non-coding upstream 548328 18835540 ~ 18837485 (-)
G142176 NA non-coding upstream 1261429 19548641 ~ 19548932 (-)
G142200 NA non-coding upstream 1310117 19597329 ~ 19599114 (-)
G141826 NA other downstream 1538572 16748061 ~ 16748431 (-)
AMCG00003231 NA other downstream 3146184 15056643 ~ 15140819 (-)
AMCG00003214 phs,pcbd1,LOC107743500,LOC107601888 other downstream 3612583 14669415 ~ 14674420 (-)
AMCG00003164 sec24c other downstream 4856679 13407272 ~ 13430324 (-)
G141004 NA other downstream 5407582 12861426 ~ 12879421 (-)
AMCG00003320 NA other upstream 1256425 19543637 ~ 19569615 (-)
AMCG00003337 cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 other upstream 1514867 19802079 ~ 19876762 (-)

Expression


Co-expression Network