Gene
RNA
| Item | Value |
|---|---|
| gene id | G142066 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 18306362 ~ 18306683 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU178720 | True | 322 | lncRNA | 0.57 | 1 | 18306362 | 18306683 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003303 | NA | coding | downstream | 227375 | 18075927 ~ 18078987 (-) |
| AMCG00003304 | NA | coding | downstream | 335752 | 17939871 ~ 17970610 (-) |
| AMCG00003300 | NA | coding | downstream | 379379 | 17924912 ~ 17926983 (-) |
| AMCG00003299 | LOC104922112,LOC107390704 | coding | downstream | 399954 | 17903301 ~ 17906408 (-) |
| AMCG00003296 | NA | coding | downstream | 449842 | 17849780 ~ 17856520 (-) |
| AMCG00003307 | LOC106586800,LOC103372478 | coding | upstream | 535623 | 18842306 ~ 18888405 (-) |
| AMCG00003310 | NA | coding | upstream | 741993 | 19048676 ~ 19051173 (-) |
| AMCG00003309 | cfap58 | coding | upstream | 775668 | 19082351 ~ 19120849 (-) |
| AMCG00003308 | NA | coding | upstream | 814177 | 19120860 ~ 19129382 (-) |
| AMCG00003313 | NA | coding | upstream | 925128 | 19231811 ~ 19254717 (-) |
| G142064 | NA | non-coding | downstream | 1384 | 18304631 ~ 18304978 (-) |
| G142060 | NA | non-coding | downstream | 19150 | 18287003 ~ 18287212 (-) |
| G141879 | LOC107575789 | non-coding | downstream | 1368316 | 16937634 ~ 16938046 (-) |
| G141871 | aldh18a1,LOC107684039 | non-coding | downstream | 1386862 | 16914938 ~ 16919500 (-) |
| G141795 | NA | non-coding | downstream | 1650195 | 16653691 ~ 16656167 (-) |
| G142090 | NA | non-coding | upstream | 528857 | 18835540 ~ 18837485 (-) |
| G142176 | NA | non-coding | upstream | 1241958 | 19548641 ~ 19548932 (-) |
| G142200 | NA | non-coding | upstream | 1290646 | 19597329 ~ 19599114 (-) |
| G142348 | NA | non-coding | upstream | 1874112 | 20180795 ~ 20181023 (-) |
| G142357 | NA | non-coding | upstream | 2068703 | 20375386 ~ 20375626 (-) |
| G141826 | NA | other | downstream | 1557931 | 16748061 ~ 16748431 (-) |
| AMCG00003231 | NA | other | downstream | 3165543 | 15056643 ~ 15140819 (-) |
| AMCG00003214 | phs,pcbd1,LOC107743500,LOC107601888 | other | downstream | 3631942 | 14669415 ~ 14674420 (-) |
| AMCG00003164 | sec24c | other | downstream | 4876038 | 13407272 ~ 13430324 (-) |
| G141004 | NA | other | downstream | 5426941 | 12861426 ~ 12879421 (-) |
| AMCG00003320 | NA | other | upstream | 1236954 | 19543637 ~ 19569615 (-) |
| AMCG00003337 | cnnm2b,borcs7,LOC107738473,LOC107708677,LOC107699104 | other | upstream | 1495396 | 19802079 ~ 19876762 (-) |
